Hi, I'm new both to Linux (running Ubuntu) and Neuron so this question might seem silly.
I've managed to install Neuron from the source code using this guide:
http://www.neuron.yale.edu/neuron/downl ... pile_linux
Now I can run the demo with the command
$HOME/Neuron/nrn/i686/bin/neurondemo
But I don't know how to run the full program, or if it is even necessary. When I run the demo I get a window named NEURON Main Menu, is this the full version or do I need a separate command?
What to do after install? (getting neurondemo to work)
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Re: What to do after install? (getting neurondemo to work)
If the command
neurondemo
shows you only the NEURON Main Menu toolbar and nothing else, there is one more step:
as root, compile the mod files that are associated with neurondemo.* This happens automatically if you execute the command
neurondemo
with root privileges--which under Ubuntu means you have to execute
sudo neurondemo
This should launch the compilation of those mod files, and after a bunch of messages fly by (and assuming that all goes well) you will eventually see NEURON start up and show you the controls for the neurondemo program.
*--After those files have been compiled, you can just run
neurondemo
as an ordinary user.
neurondemo
shows you only the NEURON Main Menu toolbar and nothing else, there is one more step:
as root, compile the mod files that are associated with neurondemo.* This happens automatically if you execute the command
neurondemo
with root privileges--which under Ubuntu means you have to execute
sudo neurondemo
This should launch the compilation of those mod files, and after a bunch of messages fly by (and assuming that all goes well) you will eventually see NEURON start up and show you the controls for the neurondemo program.
*--After those files have been compiled, you can just run
neurondemo
as an ordinary user.
Re: What to do after install? (getting neurondemo to work)
Ah Neurondemo works fine it was Neuron itself I was having trouble with. Managed to launch it with "nrngui" so all is well for the moment. Working through the tutorials and plan on getting the book so I expect a few (many) more question-marks will appear, nice to know I can get such fast replies here!