NEURON + Python

Moderator: hines

New Topic

435 topics

Page 1 of 9
- Jump to page:
1
2
3
4
5
…
9
Next

Topics

Replies

Views

Last post

Use NEURON's native GUI tools with Python!

Last post by ted « Fri Sep 27, 2019 11:23 am
Replies: 2
by ted » Tue Aug 08, 2017 2:48 pm

2 Replies

63365 Views

Last post by ted
Fri Sep 27, 2019 11:23 am
More NEURON + Python documentation

Last post by ramcdougal « Wed Oct 24, 2018 7:07 am
Replies: 6
by ted » Mon Mar 24, 2008 10:17 am

6 Replies

78648 Views

Last post by ramcdougal
Wed Oct 24, 2018 7:07 am
Changing parameters in NMODL files from within a Python script?

Last post by espenh « Wed Jun 11, 2025 3:17 am
Replies: 3
by espenh » Tue Feb 25, 2025 12:39 pm

3 Replies

38611 Views

Last post by espenh
Wed Jun 11, 2025 3:17 am
Coreneuron CPU and multisplit

Last post by ted « Tue Feb 25, 2025 8:43 am
Replies: 1
by bremen » Tue Feb 25, 2025 4:39 am

1 Replies

14301 Views

Last post by ted
Tue Feb 25, 2025 8:43 am
Python Section syntax error

Last post by hines « Thu Feb 20, 2025 7:55 am
Replies: 5
by dragoneurotic » Tue Feb 11, 2025 1:52 pm

5 Replies

20422 Views

Last post by hines
Thu Feb 20, 2025 7:55 am
kernel dying in unusual circumstances

Last post by ted « Thu Feb 06, 2025 12:58 pm
Replies: 1
by radger » Tue Feb 04, 2025 7:56 am

1 Replies

19558 Views

Last post by ted
Thu Feb 06, 2025 12:58 pm
list the mechanisms loaded from the nrnmech.dll.file

Last post by ted « Mon Feb 03, 2025 12:02 pm
Replies: 3
by dragoneurotic » Thu Jan 30, 2025 6:05 pm

3 Replies

22328 Views

Last post by ted
Mon Feb 03, 2025 12:02 pm
Type annotation of NEURON objects

Last post by hines « Mon Sep 16, 2024 9:30 am
Replies: 3
by jared » Thu Aug 22, 2024 3:09 pm

3 Replies

46465 Views

Last post by hines
Mon Sep 16, 2024 9:30 am
h.frecord_init() and Python Multiprocessing

Last post by Robert Claar « Mon Aug 19, 2024 1:53 pm
Replies: 7
by Robert Claar » Mon Aug 05, 2024 11:07 am

7 Replies

32661 Views

Last post by Robert Claar
Mon Aug 19, 2024 1:53 pm
Using a hoc cell template with Python

Last post by ted « Fri Aug 16, 2024 11:28 am
Replies: 3
by pascal » Wed Aug 14, 2024 12:59 pm

3 Replies

23390 Views

Last post by ted
Fri Aug 16, 2024 11:28 am
can't run without GUI in Linux + slurm

Last post by ted « Wed Aug 14, 2024 12:00 pm
Replies: 2
by patoorio » Mon Aug 12, 2024 11:36 am

2 Replies

21568 Views

Last post by ted
Wed Aug 14, 2024 12:00 pm
Disagreement between Crank-Nicolson, Backward Euler, and CVODE

Last post by ajpc6d « Thu Aug 08, 2024 1:04 pm
Replies: 2
by ajpc6d » Mon Aug 05, 2024 12:42 pm

2 Replies

28736 Views

Last post by ajpc6d
Thu Aug 08, 2024 1:04 pm
Issue with asc vs swc file format

Last post by louiepatch « Mon Aug 05, 2024 11:00 pm

by louiepatch » Mon Aug 05, 2024 11:00 pm

0 Replies

38459 Views

Last post by louiepatch
Mon Aug 05, 2024 11:00 pm
Non-uniform parameter with colon notation?

Last post by patoorio « Wed Jul 31, 2024 3:46 pm
Replies: 2
by patoorio » Wed Jul 31, 2024 10:31 am

2 Replies

25475 Views

Last post by patoorio
Wed Jul 31, 2024 3:46 pm
Diameter of a Squid Giant Axon Model

Last post by mi2n « Fri Jul 19, 2024 4:44 am
Replies: 6
by mi2n » Tue Feb 27, 2024 4:13 am

6 Replies

52652 Views

Last post by mi2n
Fri Jul 19, 2024 4:44 am
change the onset time of voltage clamp

Last post by ted « Mon Jul 15, 2024 12:19 pm
Replies: 3
by Ziling Wang » Fri Jul 12, 2024 1:44 am

3 Replies

34743 Views

Last post by ted
Mon Jul 15, 2024 12:19 pm
Can't we write tautable.hoc in Python?

Last post by mi2n « Mon Jul 01, 2024 2:27 am
Replies: 2
by mi2n » Fri May 24, 2024 3:36 am

2 Replies

28085 Views

Last post by mi2n
Mon Jul 01, 2024 2:27 am
Loading a Linear Circuit Mechanism in Python

Last post by ted « Fri Jun 14, 2024 10:24 am
Replies: 1
by swienbar » Fri Jun 07, 2024 2:26 pm

1 Replies

30800 Views

Last post by ted
Fri Jun 14, 2024 10:24 am
Using CVode with Short Pulse Stimuli

Last post by ajpc6d « Wed Jun 05, 2024 7:42 pm

by ajpc6d » Wed Jun 05, 2024 7:42 pm

0 Replies

44924 Views

Last post by ajpc6d
Wed Jun 05, 2024 7:42 pm
Setting and Confirming NEURON's Solver

Last post by ajpc6d « Tue Jun 04, 2024 8:22 pm
Replies: 3
by ajpc6d » Fri May 24, 2024 12:11 pm

3 Replies

29255 Views

Last post by ajpc6d
Tue Jun 04, 2024 8:22 pm
NetStim causes SaveState crash

Last post by ted « Sat Apr 13, 2024 3:45 pm
Replies: 6
by ajpc6d » Fri Mar 22, 2024 7:11 pm

6 Replies

44094 Views

Last post by ted
Sat Apr 13, 2024 3:45 pm
Python Code Continues Execution Despite HOC Error

Last post by EleBern « Wed Apr 10, 2024 10:04 am
Replies: 4
by EleBern » Tue Apr 02, 2024 5:32 am

4 Replies

32609 Views

Last post by EleBern
Wed Apr 10, 2024 10:04 am
Saving fixed timestep data using cvode variable timestep integration

Last post by Robert Claar « Wed Feb 21, 2024 7:06 am
Replies: 2
by Robert Claar » Tue Feb 20, 2024 1:53 pm

2 Replies

32299 Views

Last post by Robert Claar
Wed Feb 21, 2024 7:06 am
User defined function to set play vectors

Last post by Robert Claar « Tue Dec 19, 2023 2:27 pm
Replies: 2
by Robert Claar » Wed Nov 22, 2023 3:39 pm

2 Replies

64890 Views

Last post by Robert Claar
Tue Dec 19, 2023 2:27 pm
Issue with SaveState

Last post by pascal « Tue Dec 05, 2023 4:09 pm
Replies: 2
by pascal » Fri Nov 17, 2023 7:42 pm

2 Replies

48660 Views

Last post by pascal
Tue Dec 05, 2023 4:09 pm
Dealing with objects defined in functions

Last post by ted « Fri Oct 27, 2023 9:48 am
Replies: 1
by genis » Mon Oct 23, 2023 3:54 pm

1 Replies

39551 Views

Last post by ted
Fri Oct 27, 2023 9:48 am
CoreNeuron verbose output

Last post by ted « Mon Oct 23, 2023 11:44 am
Replies: 3
by sean » Fri Oct 20, 2023 8:38 am

3 Replies

41382 Views

Last post by ted
Mon Oct 23, 2023 11:44 am
h.parallelContext in a model being simulated on a cluster

Last post by Nilapratim_S « Mon Oct 16, 2023 1:16 pm
Replies: 3
by Nilapratim_S » Mon Oct 16, 2023 1:10 am

3 Replies

39386 Views

Last post by Nilapratim_S
Mon Oct 16, 2023 1:16 pm
Different total area from python and hoc cell class

Last post by ted « Tue Oct 03, 2023 12:40 pm
Replies: 5
by opdalex » Thu Sep 28, 2023 6:23 am

5 Replies

48008 Views

Last post by ted
Tue Oct 03, 2023 12:40 pm
MulRunFitter & Python

Last post by ted « Tue Sep 12, 2023 3:26 pm
Replies: 3
by Robert Claar » Sat Sep 09, 2023 1:03 pm

3 Replies

42245 Views

Last post by ted
Tue Sep 12, 2023 3:26 pm
Play Stimulus Vectors Sequentially During Run-time

Last post by ajpc6d « Thu Aug 17, 2023 10:06 am
Replies: 2
by ajpc6d » Tue Aug 15, 2023 3:28 pm

2 Replies

43990 Views

Last post by ajpc6d
Thu Aug 17, 2023 10:06 am
Play a Unique Vector to Each Model Segment

Last post by ramcdougal « Fri Jul 28, 2023 10:43 am
Replies: 1
by ajpc6d » Thu Jul 27, 2023 2:46 pm

1 Replies

41537 Views

Last post by ramcdougal
Fri Jul 28, 2023 10:43 am
h.continuerun() behavior different when cvode is active

Last post by Robert Claar « Thu Jul 06, 2023 4:53 pm
Replies: 2
by Robert Claar » Mon Jun 26, 2023 5:06 pm

2 Replies

42866 Views

Last post by Robert Claar
Thu Jul 06, 2023 4:53 pm
Gap junction network not seeming to conduct

Last post by ted « Tue Jul 04, 2023 5:05 pm
Replies: 3
by swienbar » Thu Jun 29, 2023 2:55 pm

3 Replies

44506 Views

Last post by ted
Tue Jul 04, 2023 5:05 pm
Unable to access current attribute.

Last post by ramcdougal « Thu Jun 29, 2023 10:39 am
Replies: 1
by roybens » Wed Jun 28, 2023 10:30 pm

1 Replies

40904 Views

Last post by ramcdougal
Thu Jun 29, 2023 10:39 am
Two voltage clamp with a delay

Last post by bremen « Sat Jun 24, 2023 12:38 pm
Replies: 1
by bremen » Fri Jun 09, 2023 4:48 am

1 Replies

40431 Views

Last post by bremen
Sat Jun 24, 2023 12:38 pm
ModelView and ModuleNotFoundError: No module named 'numpy'

Last post by wlkath « Fri Jun 02, 2023 9:49 am
Replies: 7
by wlkath » Wed May 17, 2023 4:26 pm

7 Replies

52086 Views

Last post by wlkath
Fri Jun 02, 2023 9:49 am
How to cut the simulation in-between into two runs?

Last post by ramcdougal « Thu Jun 01, 2023 9:53 pm
Replies: 6
by gaoyy18 » Mon May 22, 2023 5:44 am

6 Replies

51805 Views

Last post by ramcdougal
Thu Jun 01, 2023 9:53 pm
The integration method and results of one compartment with only HH channel

Last post by gaoyy18 « Mon May 22, 2023 6:01 am
Replies: 1
by gaoyy18 » Tue Mar 14, 2023 12:35 pm

1 Replies

41786 Views

Last post by gaoyy18
Mon May 22, 2023 6:01 am
Plotshape question

Last post by wlkath « Tue May 16, 2023 12:04 pm
Replies: 2
by wlkath » Sat May 13, 2023 5:20 pm

2 Replies

41380 Views

Last post by wlkath
Tue May 16, 2023 12:04 pm
What is a NEURON equivalent of a point-neuron?

Last post by ted « Fri Apr 28, 2023 11:04 am
Replies: 3
by mi2n » Thu Apr 13, 2023 12:24 pm

3 Replies

41610 Views

Last post by ted
Fri Apr 28, 2023 11:04 am
"Linear Circuits Builder" programmatically (Python)

Last post by mgiugliano « Thu Mar 30, 2023 1:30 pm

by mgiugliano » Thu Mar 30, 2023 1:30 pm

0 Replies

75383 Views

Last post by mgiugliano
Thu Mar 30, 2023 1:30 pm
Null pointer error when trying to access the pointer through python

Last post by ted « Wed Mar 29, 2023 7:16 pm
Replies: 4
by ipv1313 » Sun Mar 26, 2023 6:06 am

4 Replies

40857 Views

Last post by ted
Wed Mar 29, 2023 7:16 pm
Unbounded Membrane Voltage Increase

Last post by ted « Mon Mar 20, 2023 3:23 pm
Replies: 5
by ajpc6d » Mon Mar 13, 2023 1:41 pm

5 Replies

42421 Views

Last post by ted
Mon Mar 20, 2023 3:23 pm
Using external file to set parameter value in MOD file

Last post by ted « Thu Mar 16, 2023 12:02 am
Replies: 3
by Robert Claar » Fri Feb 17, 2023 9:05 am

3 Replies

36408 Views

Last post by ted
Thu Mar 16, 2023 12:02 am
What is the name of built-in inhibitive synapse function in NEURON corresponding with h.ExpSyn()?

Last post by cassiehu « Thu Feb 23, 2023 2:54 am
Replies: 7
by cassiehu » Sun Feb 19, 2023 7:22 am

7 Replies

37295 Views

Last post by cassiehu
Thu Feb 23, 2023 2:54 am
Stimulating a Cell

Last post by ajpc6d « Tue Feb 14, 2023 8:13 pm
Replies: 10
by ajpc6d » Tue Jan 03, 2023 9:30 pm

10 Replies

107357 Views

Last post by ajpc6d
Tue Feb 14, 2023 8:13 pm
Steady state init with voltage VS with SaveState

Last post by ted « Thu Feb 09, 2023 1:30 pm
Replies: 4
by gabrielggn » Thu Feb 02, 2023 2:02 pm

4 Replies

38885 Views

Last post by ted
Thu Feb 09, 2023 1:30 pm
how to add a current clamp in Python?

Last post by cassiehu « Sun Feb 05, 2023 7:33 am
Replies: 13
by cassiehu » Sat Dec 03, 2022 7:12 am

13 Replies

49833 Views

Last post by cassiehu
Sun Feb 05, 2023 7:33 am
Nstack - stack too deep in python

Last post by ted « Fri Jan 27, 2023 11:34 am
Replies: 2
by gabrielggn » Mon Sep 19, 2022 2:58 pm

2 Replies

36513 Views

Last post by ted
Fri Jan 27, 2023 11:34 am

New Topic

435 topics

Page 1 of 9
- Jump to page:
1
2
3
4
5
…
9
Next

Return to Board Index

Forum permissions

You cannot post new topics in this forum
You cannot reply to topics in this forum
You cannot edit your posts in this forum
You cannot delete your posts in this forum