Search found 8 matches

by tort
Wed Oct 04, 2006 4:07 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: Programming new integrate and fire neurons: how to reset v?
Replies: 1
Views: 4287

Programming new integrate and fire neurons: how to reset v?

Hi, I'm interested in programming an integrate and fire neuron which is somewhat similar to intfire4. However, I want to work with two types of inhibitory synapses (GABAA fast and slow) and also add noise. So, in order to construct such a cell, I need to know how can I reset a voltage (of the soma c...
by tort
Wed Aug 09, 2006 12:16 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: Axonal delay for simplified synapse kinetic model
Replies: 3
Views: 5305

Ok, I tested this last option proposed by Hines and it seems to be working fine (except by a unit complain in lag_vpre_delay), though I still didn't implement it in a larger network. Thank you again! ps just for the record, in my code above the sentence "SOLVE state METHOD cnexp" was missi...
by tort
Tue Aug 08, 2006 4:28 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: Axonal delay for simplified synapse kinetic model
Replies: 3
Views: 5305

Axonal delay for simplified synapse kinetic model

Hi, I have the following code for a point process describing an inhibitory synapse: NEURON { POINT_PROCESS Isyn RANGE gmax, g, i,e GLOBAL alpha,beta,thetasyn NONSPECIFIC_CURRENT i POINTER vpre } UNITS { (nA) = (nanoamp) (mV) = (millivolt) (uS) = (microsiemens) } PARAMETER { gmax=0.00001 (uS) alpha=1...
by tort
Thu Jul 27, 2006 3:56 pm
Forum: Getting started
Topic: integer to string in NEURON
Replies: 2
Views: 5406

OK, problem solved, thank you very much for your help!
by tort
Wed Jul 26, 2006 6:57 pm
Forum: Getting started
Topic: integer to string in NEURON
Replies: 2
Views: 5406

integer to string in NEURON

Hi, As I have stochastic parts in my model, I have to run the simulation several times, which I found out could be obtained by say proc start(){ for(x=0; x<N; x=x+1) { run() } } Each simulation leads to a .dat file (I changed the run procedure accordingly). So, after N simulation I would like to hav...
by tort
Tue May 23, 2006 1:57 pm
Forum: OS X
Topic: OSX 10.4.6 compiling mod files
Replies: 4
Views: 9340

Yes, I've been using the program the last days and it is working properly.
Thank you again!
by tort
Fri May 19, 2006 7:00 pm
Forum: OS X
Topic: OSX 10.4.6 compiling mod files
Replies: 4
Views: 9340

Ok, now when I drag my passive.mod to mknrndll, it creates a i686 folder with the files: libnrnmech.la ; mod_func.c ; passive.c ; passive.lo ; special ; mod_func_lo ; and a shortcut to passive.mod , and I get the following messages Creating i686 directory for .o files. "/Volumes/NEURON-5.9/NEUR...
by tort
Fri May 19, 2006 1:32 pm
Forum: OS X
Topic: OSX 10.4.6 compiling mod files
Replies: 4
Views: 9340

OSX 10.4.6 compiling mod files

Hi, I'm having a problem when I try to compile .mod files (for instance, I'm trying to compile a simple passive.mod, and I'm using an apple laptop with OSX 10.4.6 and NEURON 5-8). I drag the file to mknrndll and it partially compiles, it creates a powerpc directory with passive.c and passive.lo file...