Search found 7 matches

by Danko Georgiev
Thu May 12, 2011 10:39 pm
Forum: Getting started
Topic: Bug in the Cell Builder or Distributed Mechanisms manager
Replies: 3
Views: 2768

Bug in the Distributed Mechanisms manager?

Dear Ted, Thanks for your reply. Actually I was doing what you suggest here "... you can do that either by ... or by retrieving session files for the GUI tools that manage global parameters." Indeed, first I loaded .ses files for the modeled channels, then I loaded .hoc file with the 3D neuron with ...
by Danko Georgiev
Thu May 12, 2011 7:11 am
Forum: Getting started
Topic: Bug in the Cell Builder or Distributed Mechanisms manager
Replies: 3
Views: 2768

Bug in the Cell Builder or Distributed Mechanisms manager

Dear Ted, Today I have uninstalled completely my NEURON 7.1 version and installed fresh copy. This is just to ensure that the "bug" is really there and not because I customized my NEURON (as you suggested in your previous reply to my post). I have found manual solution to the bug that I am reporting...
by Danko Georgiev
Tue Apr 26, 2011 12:15 pm
Forum: Other questions
Topic: Units of currrents in shape plot
Replies: 3
Views: 1402

Re: Units of currrents in shape plot

Dear Ted, Thanks for your prompt reply. In regards to currents only now I have noticed in The NEURON Book the remark that the value given in mA/cm^2 is equivalent to the one given in nA provided that the compartment has a surface area of 100 um^2 (indeed 1 mA/cm^2 x 100 um^2 = 1 nA). Now is clear th...
by Danko Georgiev
Tue Apr 26, 2011 8:44 am
Forum: Other questions
Topic: Units of currrents in shape plot
Replies: 3
Views: 1402

Units of currrents in shape plot

Dear Ted,

I would like to ask whether all currents are plotted by default in units of [mA/cm^2]? I have searched through The NEURON book and it seems that these are the assigned units for sodium, potassium and calcium currents within the various source codes.

Regards, Danko
by Danko Georgiev
Sun Mar 27, 2011 6:57 am
Forum: Adding new mechanisms and functions to NEURON
Topic: exp2syn without NetCon
Replies: 21
Views: 8452

Re: exp2syn without NetCon

Hi Ted, thanks very much for providing the code for exp2syn with delay. Indeed i also noticed that the standard AlphaSynapse has only one constant not two. And yes, I am modeling a single neuron not network, so I wanted to input the synapse and activate it at predetermined time. So as far I understa...
by Danko Georgiev
Thu Oct 21, 2010 8:00 am
Forum: Suggestions and Feedback
Topic: Paste in Fitting > Y-expr
Replies: 3
Views: 13067

Re: Paste in Fitting > Y-expr

Dear Ted,
Thanks for your reply. I will try to define such useful one variable functions myself. Thanks for the code, it is very useful to have such code template.
by Danko Georgiev
Fri Oct 15, 2010 10:56 am
Forum: Suggestions and Feedback
Topic: Paste in Fitting > Y-expr
Replies: 3
Views: 13067

Paste in Fitting > Y-expr

Dear authors, I would like to say that NEURON is great once you get used to it. There are nice tutorials online, so I have learned the basics. Here I would like to request if you could update the Fitting > Parameterized Function > Y-expr so that it can accept text to be pasted from the clipboard. Br...