VERSION RELEASES

[vbragin]

NetPyNE v1.1.0 is now available. For a complete list of changes and bug fixes see: https://github.com/suny-downstate-medic ... tag/v1.1.0
See here for instructions to install or update to the latest version: https://www.netpyne.org/documentation/installation

New features

- Added extracellular stimulation with a supporting xtra.mod (which includes a global variable defining the temporal modulation and a pointer to link the extracellular mechanism in NEURON). Useful for large networks
- Improved netParams validation (mechs validation, improved error messages)
- added ability to save transmembrane current for each segment
- Updated options for batch communication (see netpyne documentation: "running a batch job (beta)")

Bug fixes

- Solve minor bug in the uniform field for extracelular stimulation (sign). Deposited the xtra.mod in support module.
- Fixed batch SGE example (credit: Adam Newton)
- Solved small bug when plotting colorbar in the raster plot colored by the LFP phase
- Solved conflict between diversity and segment coordinates (per population), used in LFP setups
- Added extracellular stimulation (option: without compiling an additional .mod file - large memory requirements-)
- Update of documentation (stimSourceParams and stimTargetParams) incorporating how to define extracellular stimulations
- Fixed ODict in examples/batchCell (credit: Hyunsu Lee)
- Fix in RxD to support NEURON 9 (credit: Adam Newton)
- Fixed recording from variables of Point process
- Fixed time slicing on pre-loaded data in plotCSD() (credit: Nikita Novikov)
- Fixed sbi deprecation error. Fixes in docs formatting
- Fixes, refactoring and fail-fast checks in multisinaptic connections
- Fix verbatim function defs in mod files (credit: Ankur Sinha)