Adding new mechanisms and functions to NEURON

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"My mechanisms don't load!"

Last post by mildan « Wed Jun 20, 2018 4:38 am
Replies: 21
by ted » Wed Aug 11, 2010 10:30 am
1

2
21 Replies

42757 Views

Last post by mildan
Wed Jun 20, 2018 4:38 am
How to implement temperature dependent rates

Last post by bosleyjr « Tue Jun 18, 2013 4:59 pm
Replies: 3
by ted » Wed Mar 15, 2006 12:15 pm

3 Replies

19035 Views

Last post by bosleyjr
Tue Jun 18, 2013 4:59 pm
Block sequence in NMODL

Last post by ted « Thu Aug 31, 2006 11:05 am

by ted » Thu Aug 31, 2006 11:05 am

0 Replies

17285 Views

Last post by ted
Thu Aug 31, 2006 11:05 am
Adding new mechanisms to NEURON

Last post by ted « Thu Aug 03, 2006 5:11 pm
Replies: 1
by ted » Thu Dec 15, 2005 4:35 pm

1 Replies

22080 Views

Last post by ted
Thu Aug 03, 2006 5:11 pm
Where to learn about mod files and NMODL

Last post by ted « Thu May 19, 2005 10:11 pm

by ted » Thu May 19, 2005 10:11 pm

0 Replies

32481 Views

Last post by ted
Thu May 19, 2005 10:11 pm
Using NMODL integration of ODEs: sparse

Last post by gaoyy18 « Mon Apr 03, 2023 2:03 am
Replies: 6
by gaoyy18 » Mon Mar 27, 2023 8:56 am

6 Replies

348 Views

Last post by gaoyy18
Mon Apr 03, 2023 2:03 am
What is the numeric integration method of cnexp?

Last post by ted « Wed Mar 29, 2023 11:41 am
Replies: 2
by gaoyy18 » Sun Mar 26, 2023 12:42 pm

2 Replies

238 Views

Last post by ted
Wed Mar 29, 2023 11:41 am
Current NMODL Best Practices

Last post by ted « Mon Mar 20, 2023 8:43 pm
Replies: 3
by ajpc6d » Mon Mar 20, 2023 11:19 am

3 Replies

140 Views

Last post by ted
Mon Mar 20, 2023 8:43 pm
Add a VClamp of a specific form.

Last post by cassiehu « Fri Mar 03, 2023 8:30 am
Replies: 3
by cassiehu » Thu Mar 02, 2023 4:21 am

3 Replies

294 Views

Last post by cassiehu
Fri Mar 03, 2023 8:30 am
alternating the expression of GABA current in mod file

Last post by ted « Mon Jan 02, 2023 11:52 pm
Replies: 5
by alexandrapierri » Wed Dec 07, 2022 9:06 pm

5 Replies

817 Views

Last post by ted
Mon Jan 02, 2023 11:52 pm
Is inserting the hh mechanism compulsory?

Last post by ted « Mon Dec 26, 2022 11:25 am
Replies: 1
by ipv1313 » Mon Dec 26, 2022 4:09 am

1 Replies

200 Views

Last post by ted
Mon Dec 26, 2022 11:25 am
How to get total receptor current

Last post by ted « Wed Dec 07, 2022 12:02 pm
Replies: 1
by ipv1313 » Tue Dec 06, 2022 4:58 am

1 Replies

223 Views

Last post by ted
Wed Dec 07, 2022 12:02 pm
modlunit Conversion Factor

Last post by ted « Thu Nov 10, 2022 1:51 pm
Replies: 2
by AliAli » Thu Nov 03, 2022 10:47 am

2 Replies

331 Views

Last post by ted
Thu Nov 10, 2022 1:51 pm
Insert an ion channel written in a .mod file

Last post by ted « Fri Sep 30, 2022 4:13 am
Replies: 8
by cassiehu » Sun Sep 11, 2022 10:33 pm

8 Replies

1665 Views

Last post by ted
Fri Sep 30, 2022 4:13 am
mechanisms written in python?

Last post by ted « Wed Aug 03, 2022 2:34 pm
Replies: 5
by alexandrapierri » Mon Aug 01, 2022 9:24 pm

5 Replies

1099 Views

Last post by ted
Wed Aug 03, 2022 2:34 pm
'y' is a reserved word?

Last post by fietkiewicz « Thu Jun 23, 2022 1:02 pm
Replies: 2
by fietkiewicz » Mon Jun 13, 2022 5:54 pm

2 Replies

523 Views

Last post by fietkiewicz
Thu Jun 23, 2022 1:02 pm
Does POINTER make NET_RECEIVE slower?

Last post by fietkiewicz « Thu Jun 09, 2022 10:52 am
Replies: 9
by fietkiewicz » Tue May 24, 2022 9:48 pm

9 Replies

3238 Views

Last post by fietkiewicz
Thu Jun 09, 2022 10:52 am
Help with adding equation to mechanism

Last post by ted « Thu Apr 21, 2022 2:48 pm
Replies: 7
by rquadir » Wed Apr 06, 2022 1:06 am

7 Replies

971 Views

Last post by ted
Thu Apr 21, 2022 2:48 pm
Adding delay to a graded synapse model

Last post by ted « Thu Jan 20, 2022 11:44 am
Replies: 6
by subhacom » Mon Oct 07, 2019 11:04 am

6 Replies

5860 Views

Last post by ted
Thu Jan 20, 2022 11:44 am
How to update the weight vector of a NetCon per time step

Last post by klein « Thu Jan 06, 2022 3:09 pm
Replies: 4
by klein » Mon Jan 03, 2022 11:15 pm

4 Replies

647 Views

Last post by klein
Thu Jan 06, 2022 3:09 pm
Modifying cell capacitance (cm) via a mod file (also cai)

Last post by roybens « Tue Oct 26, 2021 12:56 pm
Replies: 2
by roybens » Mon Oct 25, 2021 3:34 pm

2 Replies

923 Views

Last post by roybens
Tue Oct 26, 2021 12:56 pm
undersampling curves

Last post by ted « Tue Oct 19, 2021 12:43 pm
Replies: 9
by thitsa » Thu Oct 07, 2021 7:39 am

9 Replies

6396 Views

Last post by ted
Tue Oct 19, 2021 12:43 pm
Strangeness when recording state variable

Last post by NickHananeia « Mon Jul 12, 2021 11:36 am
Replies: 6
by NickHananeia » Thu Jul 08, 2021 8:07 am

6 Replies

1274 Views

Last post by NickHananeia
Mon Jul 12, 2021 11:36 am
Changing range parameters

Last post by renewilbers « Sun Jun 20, 2021 4:59 pm
Replies: 1
by renewilbers » Sat Jun 19, 2021 10:16 am

1 Replies

748 Views

Last post by renewilbers
Sun Jun 20, 2021 4:59 pm
Questions about the extracellular mechanism and the syntax of NMODL

Last post by ted « Mon May 10, 2021 3:03 pm
Replies: 4
by Christine Chung » Mon May 03, 2021 5:43 am

4 Replies

1341 Views

Last post by ted
Mon May 10, 2021 3:03 pm
mod file CVODE compatibility

Last post by Darshan « Fri May 07, 2021 4:17 pm
Replies: 12
by Brad » Wed Jun 15, 2005 12:13 pm

12 Replies

11220 Views

Last post by Darshan
Fri May 07, 2021 4:17 pm
calling a function from NMODL

Last post by hines « Tue Mar 23, 2021 7:47 pm
Replies: 10
by Nooshin » Sat Mar 13, 2021 7:32 pm

10 Replies

1986 Views

Last post by hines
Tue Mar 23, 2021 7:47 pm
netstim and randomness

Last post by ted « Tue Mar 09, 2021 4:14 pm
Replies: 1
by fabien tell » Sun Mar 07, 2021 12:49 pm

1 Replies

866 Views

Last post by ted
Tue Mar 09, 2021 4:14 pm
How to find EXp2Syn

Last post by fabien tell « Mon Feb 22, 2021 1:04 pm
Replies: 2
by fabien tell » Sun Feb 21, 2021 7:58 am

2 Replies

872 Views

Last post by fabien tell
Mon Feb 22, 2021 1:04 pm
Mechanisms in nrnmech.dll do not seem to be loading in python script

Last post by ted « Wed Feb 10, 2021 9:59 am
Replies: 5
by Liz_Stan_88 » Tue Feb 09, 2021 11:22 am

5 Replies

2299 Views

Last post by ted
Wed Feb 10, 2021 9:59 am
A pump MOD file and no concentration inside

Last post by ted « Mon Feb 01, 2021 1:53 pm
Replies: 3
by bremen » Sat Jan 30, 2021 3:00 am

3 Replies

966 Views

Last post by ted
Mon Feb 01, 2021 1:53 pm
Modelling of subcellular signalling

Last post by ted « Wed Nov 18, 2020 10:42 pm
Replies: 1
by jofrony » Wed Nov 18, 2020 1:25 pm

1 Replies

1076 Views

Last post by ted
Wed Nov 18, 2020 10:42 pm
Frequency dependent activation of g protein models

Last post by ted « Mon Sep 14, 2020 3:17 pm
Replies: 2
by jofrony » Tue Nov 12, 2019 6:20 am

2 Replies

5089 Views

Last post by ted
Mon Sep 14, 2020 3:17 pm
injecting continuous normally distributed noise in python

Last post by ted « Mon Sep 14, 2020 3:10 pm
Replies: 2
by thiank » Sun Aug 25, 2019 10:57 pm

2 Replies

2525 Views

Last post by ted
Mon Sep 14, 2020 3:10 pm
Defining a POINTER to be a list

Last post by itaru « Tue Aug 11, 2020 8:17 pm
Replies: 16
by dabliss » Tue Mar 17, 2015 9:52 pm
1

2
16 Replies

10615 Views

Last post by itaru
Tue Aug 11, 2020 8:17 pm
Arbitrary waveform

Last post by ted « Mon Jun 29, 2020 12:57 pm
Replies: 1
by Andela » Mon Jun 29, 2020 2:12 am

1 Replies

1228 Views

Last post by ted
Mon Jun 29, 2020 12:57 pm
ampanmda mod file working with AlphaSynapse

Last post by ted « Tue Jun 23, 2020 4:29 pm
Replies: 7
by parent41 » Fri Jun 05, 2020 10:53 am

7 Replies

3155 Views

Last post by ted
Tue Jun 23, 2020 4:29 pm
Maximum frequency of current stimulation

Last post by ted « Mon Jun 22, 2020 10:45 am
Replies: 3
by jaehoonlee13 » Thu Jun 18, 2020 4:56 am

3 Replies

1275 Views

Last post by ted
Mon Jun 22, 2020 10:45 am
using compiled mod files from python script in a different direcory

Last post by nicholasmg « Wed Apr 29, 2020 6:09 pm
Replies: 2
by nicholasmg » Wed Apr 29, 2020 5:43 pm

2 Replies

4348 Views

Last post by nicholasmg
Wed Apr 29, 2020 6:09 pm
inserting synaptic mechanisms from mod file

Last post by ted « Fri Apr 03, 2020 1:37 pm
Replies: 1
by Natali83 » Wed Apr 01, 2020 1:44 pm

1 Replies

1999 Views

Last post by ted
Fri Apr 03, 2020 1:37 pm
Syncronized concentrations in and out the membrane

Last post by bremen « Fri Mar 27, 2020 3:37 pm
Replies: 1
by bremen » Thu Mar 26, 2020 11:11 am

1 Replies

1813 Views

Last post by bremen
Fri Mar 27, 2020 3:37 pm
Interfacing NEURON with other software on runtime

Last post by Ricardo_Molinari « Wed Jan 29, 2020 4:17 pm
Replies: 4
by Ricardo_Molinari » Tue Jan 28, 2020 5:32 pm

4 Replies

1731 Views

Last post by Ricardo_Molinari
Wed Jan 29, 2020 4:17 pm
Modeling leaky integrate-and-fire neuron including Hodgkin–Huxley-like currents

Last post by ted « Tue Jan 28, 2020 12:35 pm
Replies: 1
by harrisonZ » Mon Jan 27, 2020 4:26 pm

1 Replies

1496 Views

Last post by ted
Tue Jan 28, 2020 12:35 pm
Adding cilia with an added mechanism to a dendrite

Last post by bdut « Thu Jan 16, 2020 1:40 am
Replies: 2
by bdut » Mon Jan 06, 2020 3:17 am

2 Replies

3010 Views

Last post by bdut
Thu Jan 16, 2020 1:40 am
Accessing state variables of one mechanisn in another mechanism

Last post by bdut « Fri Jan 03, 2020 4:52 am
Replies: 4
by bdut » Sun Dec 01, 2019 11:35 pm

4 Replies

1827 Views

Last post by bdut
Fri Jan 03, 2020 4:52 am
using diam and L params inside MODL file

Last post by adamjhn « Mon Dec 02, 2019 3:12 pm
Replies: 5
by ziemek » Mon Nov 25, 2019 11:16 am

5 Replies

2491 Views

Last post by adamjhn
Mon Dec 02, 2019 3:12 pm
where to declare cai and cao ?

Last post by ted « Sun Dec 01, 2019 11:37 am
Replies: 1
by rth » Sun Nov 24, 2019 10:54 pm

1 Replies

1502 Views

Last post by ted
Sun Dec 01, 2019 11:37 am
NMODL: COMPARTMENT statement in the KINETIC section

Last post by ziemek « Mon Nov 25, 2019 6:16 am
Replies: 2
by ziemek » Thu Nov 21, 2019 7:47 am

2 Replies

1387 Views

Last post by ziemek
Mon Nov 25, 2019 6:16 am
Failure rates in synapse model

Last post by jofrony « Mon Nov 25, 2019 5:05 am

by jofrony » Mon Nov 25, 2019 5:05 am

0 Replies

4896 Views

Last post by jofrony
Mon Nov 25, 2019 5:05 am
Calcium diffusion and shells

Last post by ted « Wed Nov 20, 2019 10:36 am
Replies: 5
by ziemek » Thu Nov 14, 2019 7:41 am

5 Replies

1971 Views

Last post by ted
Wed Nov 20, 2019 10:36 am

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