Search found 6 matches

by MOswald
Wed Jan 24, 2007 5:51 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: temperature/celsius and qt
Replies: 4
Views: 11086

Q10 and qt

Thank you,

That all makes a lot more sense now!

Manfred
by MOswald
Tue Jan 23, 2007 6:01 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: temperature/celsius and qt
Replies: 4
Views: 11086

temperature dependent rate functions in mod files

Hi Ted, to follow up on this, I would like to incorporate the effect of temperature on rates specified within mod files. Many mod files commonly specify a qt variable such as qt = q10^((celsius-22 (degC))/10 (degC)) where q10 = 3 or sometimes 4.5, and the qt is then incorporated in the rate function...
by MOswald
Sun Nov 19, 2006 8:40 pm
Forum: The GUI
Topic: Setting up graphs by writing code patterned after stdrun.hoc
Replies: 4
Views: 8583

plotting several variables at once

PS. Could I modify the plotVoltage() procedure to plot two or more variables into the same graph window?

I have tried addvar and addexpr commands in various ways but without success so far.

Ta, Manfred
by MOswald
Sun Nov 19, 2006 7:12 pm
Forum: The GUI
Topic: Setting up graphs by writing code patterned after stdrun.hoc
Replies: 4
Views: 8583

plotting script

Thank you for this detailed answer to my plotting question. I can see that I should be using the newPlotV() command rather than that for current, and how to specify the axis limits if I want to change them from the default axis settings. The plotVoltage() command below was provided to me by another ...
by MOswald
Thu Nov 16, 2006 7:32 pm
Forum: OS X
Topic: Compiling mod files on Intel Macbook
Replies: 4
Views: 7277

Setting graph y-axis range

Hi Ted, You were right, after installing the Developer X-tools, the compiling of mod files is now working just fine. Better still, the simulation runs too. May I ask one other question? I use the following command to plot voltage in soma and a dendritic compartment but it the y-axis is set at -1 to ...
by MOswald
Wed Nov 15, 2006 3:38 pm
Forum: OS X
Topic: Compiling mod files on Intel Macbook
Replies: 4
Views: 7277

Compiling mod files on Intel Macbook

Hi, I have installed neuron 5.9.10 on a MacBook with Intel processor and get the error message below when trying to compile a mod file with mknrndll. The compiling of the same files works fine on a mac also running on OSX-10.4. Neither the i686 nor the powerpc versions work. Any suggestions? Ta, Man...