Search found 7 matches

by JamesKyeh
Tue Mar 29, 2016 2:51 am
Forum: Getting started
Topic: Optical extracellular stimulation and xtra
Replies: 1
Views: 5914

Optical extracellular stimulation and xtra

Hello, I've been recently going through the implementation of ostim.mod from https://senselab.med.yale.edu/modeldb/showModel.cshtml?model=153196&file=/FoutzEtAl2012/ostim.mod and as such have also been learning about extracellular stimulation from older posts on the forum and the extracellular_stim_...
by JamesKyeh
Mon Mar 28, 2016 4:24 pm
Forum: NEURON + Python
Topic: Help, NEURON equivalent of this Python Code?
Replies: 2
Views: 5602

Re: Help, NEURON equivalent of this Python Code?

Upon rereading the code I see where the mistake in my question was. My apologies as my familiarity with Python is pretty low and was too quick to ask a question before looking at the code a bit more!

James
by JamesKyeh
Sat Mar 26, 2016 10:49 pm
Forum: NEURON + Python
Topic: Help, NEURON equivalent of this Python Code?
Replies: 2
Views: 5602

Help, NEURON equivalent of this Python Code?

Hello, in this model, https://senselab.med.yale.edu/modeldb/showModel.cshtml?model=153196&file=/FoutzEtAl2012/classes.py there's a line of code which (I'm assuming) places a stimulation source a set distance from a section: def rotate_optrode(self, angle, distance, sec, axis_defining_plane='z'): """...
by JamesKyeh
Fri Jan 29, 2016 1:48 pm
Forum: Getting started
Topic: Quick Setpointer syntax question
Replies: 2
Views: 5255

Re: Quick Setpointer syntax question

Ah thank you for the help! This completely answers my question and more.
by JamesKyeh
Fri Jan 29, 2016 2:19 am
Forum: Getting started
Topic: Quick Setpointer syntax question
Replies: 2
Views: 5255

Quick Setpointer syntax question

Hello, I've been trying to get a pointer from one of my point processes (ostim) to communicate with a custom channel (chanrhod) but seem to be having syntax problems. I create a new object named "stim" which is an ostim object and can use that with the setpointer command without problems. However, w...
by JamesKyeh
Thu Jan 14, 2016 11:38 am
Forum: Getting started
Topic: Problems trying to implement a custom point process
Replies: 2
Views: 5506

Re: Problems trying to implement a custom point process

Email is sent, Thank you for the help!
by JamesKyeh
Wed Jan 13, 2016 11:41 pm
Forum: Getting started
Topic: Problems trying to implement a custom point process
Replies: 2
Views: 5506

Problems trying to implement a custom point process

Hello all, I'm currently having a problem trying to implement a point process from this https://senselab.med.yale.edu/ModelDB/ShowModel.cshtml?model=153196&file=/FoutzEtAl2012/ostim.mod and some insight would be greatly appreciated. To keep it simple I've tried implementing the point process in my o...