www.neuron.yale.edu

nasrin.sh wrote:working directory is the directory which I save the matlab file?!

The same directory that you saved your .hoc file in it.

Hi, Take a look at: https://www.neuron.yale.edu/phpBB2/viewtopic.php?t=996 The solution I took for sending data to NEURON was not a good solution, but it worked for me, for a specific case that I wanted it for: "update several parameters in neuron, do the simulation, back to matlab, do the comp...

I used the command that you suggested, but same black screen(s) appear again.

This morning, I tried to run my M.file in matlab-command line: "matlab -nojvm -noFigureWindows -r apic.m" but i got the same result.

Thank you for the reply. without quit() command, Matlab waits for ever, so apic_model.hoc must have the "quit()" command as its last line of code. and after each simulation it quits without any problem but the black-cmd screen of nrniv.exe stay while the simulation is running. however, wit...

Hi, I'm controlling Neuron from Matlab in MSWin. I'm using Matlab to write some parameters that need to be changed in .hoc file to some .dat file. Then I open this file in Neuron using xopen command, to start doing simulation using these values, and records some variables then stores them in a file....