Search found 5 matches

by marmite
Mon Aug 24, 2009 4:28 am
Forum: Anatomically detailed models
Topic: NeuronJ to NEURON: Getting NLMorph to work
Replies: 2
Views: 3188

Re: NeuronJ to NEURON: Getting NLMorph to work

Could you describe in more detail how you are launching the NLMorphologyConverter? It sounds like you are not using it correctly. It is a command line application, and therefore requires you to open a terminal window *first*, from which you can then run the application (by typing in the terminal win...
by marmite
Thu May 22, 2008 12:15 pm
Forum: Anatomically detailed models
Topic: New 3D neuron morphology data format conversion utility....
Replies: 4
Views: 8653

NLMorphologyConverter version 0.6.1 released.

A new version of the morphology file format converter has been released. This is a full windows/mac/linux release. Main changes since version 0.4.0 - * MorphML support re-activated. * NeuronJ support added. * New command line options to view neuron statistics and control exported data. * Many bug fi...
by marmite
Wed Apr 16, 2008 12:58 pm
Forum: Anatomically detailed models
Topic: New 3D neuron morphology data format conversion utility....
Replies: 4
Views: 8653

Update - Latest verion...0.4.0

Just an update for those who found the converter via this forum... The NLMorphologyConverter has now made it to version 0.4.0. A lot of bugs have been fixed over the last month, though there is still some work to do to get all formats equally well supported, and to fix the remaining known bugs. Full...
by marmite
Sun Mar 09, 2008 1:03 pm
Forum: Anatomically detailed models
Topic: New 3D neuron morphology data format conversion utility....
Replies: 4
Views: 8653

In case of doubt, please make contact....

Perfectly reasonable point Of course, if anyone does feel that they would like to use the software, and do have any concerns about doing so, they can contact me directly at the email address given on the website. I am quite happy to answer any questions in private email, and quite happy to convert a...
by marmite
Sat Mar 08, 2008 2:23 pm
Forum: Anatomically detailed models
Topic: New 3D neuron morphology data format conversion utility....
Replies: 4
Views: 8653

New 3D neuron morphology data format conversion utility....

Hello, In the interests of making use of some old code, I have recently put together a little command-line utility which is designed to convert between most of the existing 3D neuron morphology formats. Including Neurolucida (both formats), SWC, Eutectics, Nevin, Neuron (2 varieties so far - SWC2HOC...