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Originally, we had trouble having import 3D connect primary somas properly. we traced the soma as a single oval and tried to trace the dendrites so that they will began within the boundaries of the soma so import3D will recognize this is where the dendrite should connect to the soma. Most dendrites ...

We are having some difficulty getting Import3D to recognize the soma and approximate its shape as described above. When we import a cell with a single oval for the soma, it appears in NEURON as a single open oval. We tried to close the loop in Neurolucida by selecting "close contour" when ...