www.neuron.yale.edu

I get this: NEURON: Pointer to src is not in the currently accessed section <Astrocyte.Astrocyte object at 0x15037d447ac0>.soma near line 0 ^ ParallelContext[0].source_var(..., 2000) Traceback (most recent call last): File "ringtest.py", line 232, in <module> settings.pc.source_var(ca[cyt]...

Hi Ted,
Yes that's the paper I was trying to refer. I'll try your second suggestion and see it works well within my Python script.

Thanks,
Itaru.

Hi Ted, I'm trying to pass an astrocyte's Ca2+ concentration (which is modeled by RxD) to the neighboring pyramidal cells and interneurons via point process synapses that inhibit and excite the two types describing the cai to i conversion equations as described Ma et al. 2013. As I also want to buil...

Is this supported? I'd like to pass calcium ion concentration info of astrocytes to neighboring pyramidal cells.

Hi,
Has anyone tried to profile RxD code on a platform that provides the tool?

I looked in the "test/rxd" directory, but could not find usage examples of RxD + the ParallelContext class. As I am having a problem incorporating
RxD statements into my Python script, examples would be appreciated.

Sorry, there's a reference to the paper on the model.

More examples are appreciated, should I look for them in the upstream RxD folder?

Hi,
Is this based upon what model, I'd like to extend this example so that I can use the Li-Rinzel '94 model.

Hi all,
I am looking at the Calcium Wave Tutorial at: https://neuron.yale.edu/neuron/docs/rea ... lcium-wave , this works on my MacBook Pro perfectly with the latest official release of NEURON. Now I am wondering if RxD is designed to work well with ParallelContexts?

Sure Ted I will re-read the NEURON Book's relevant chapters; sometimes even as an end-user I'd like to really see the C code can generate an optimized piece of code.

latter; those translated C codes still look to me not human readable in my humble opinion.
I'd like to know the process so I can write clearer .mod files.

Hi,
Is there documentation to explain how mod files are translated into C files?
I've been using today's master branch of NEURON.

True. Thanks.

Hi all,
I'd like to know more about the up-coming 8.0 release.

Thanks,
Itaru.