www.neuron.yale.edu

Thank you Ted for such quick response. I rather meant taking an image, and present it to my neural circuit model. Like a small retina, if saying very basic. I've looked through ModelDB and found something related like Corem simulator or Virtual Retina but they designed for other simulators like Nest.

Hello! I just wanted to double check before creating my own wheel. Is there a library/tool that allow to represent images/movies in NEURON simulator? For example take an image (28x28) and represent it as a grid of NetStim (28x28) where each NetStim corresponds to a single image pixel.

Hi! The error message clearly say that you are trying to access a string value as float (numeric type). Please post the links to the code from neuron website you are mentioning.

Thank you for the information! In my case the solution was to use the last point of soma for connection of other sections. So, instead of parent id 1 use 3 ... 4 2 0.292800 -4.265800 -5.562200 0.325200 1 ... Use # index type X Y Z radius parent ... 4 2 0.292800 -4.265800 -5.562200 0.325200 3 ... And...

Thank you, Ted! My main question is how I can avoid of adding 2 additional points in case soma is a cylinder already. In order to avoid any misunderstandings here is the code: SimpleCellCylinder.swc # index type X Y Z radius parent 1 1 -5.442800 0.000000 0.000000 5.442800 -1 2 1 0.000000 0.000000 0....

Hi! Can you please point to me to the source code/rule that adds new points to a soma that is loaded from .swc? An example. Lets say I have a morphology with a soma. # index type X Y Z radius parent 1 1 0.000000 0.000000 0.000000 5.442800 -1 2 2 0.292800 -4.265800 -5.562200 0.325200 1 3 2 0.654500 -...

Hi! I receive 404 (Not Found) error when I try to access https://www.neuron.yale.edu/neuron/stat ... index.html. Is it fine?

Also here a couple of examples: begintemplate String public s strdef s endtemplate String begintemplate ObjDict public get, put, setKeys objref keyList, valueList, nil proc init() { keyList = new List() valueList = new List() } proc put() {localobj key key = new String() key.s = $s1 keyList.append(k...

There is an implementation of Dictionary in this post viewtopic.php?t=1438

In Python we have dicts like this Is there an analogue in HOC?

Thank you so much! This is a very useful information for me.

Thank you, Ted! I heard of *d_lambda* but forgot its specifics. My purpose was rather educational.

Aha, I see. It is up to the number of segments in section. With high enough number of segments the synapse is placed to a nearly correct position otherwise it is placed as close as possible. So if I do then I have 0.775 as my synapse position.
This is very tricky.

Hi! Can somebody please clarify. It looks I'm missing something fundamental. How to know that syn is at 0.77 offset? get_segment().x , get_loc return 0.5 . Do I miss something? Is syn moved to the offset 0.5 after instantiation? from neuron import h h.load_file('stdrun.hoc') dend = h.Section(name='d...

Hi! Does it work fine if you plot directly instead of saving figure? What would happen if you replace with ?