Hi Ted,
the whole code has been deposited in my GitHub, you can run the model if you like locally
https://github.com/antoniosdougalis/Hum ... al_Neurons
Antonios
Search found 5 matches
- Thu Feb 20, 2025 7:33 am
- Forum: NEURON + Python
- Topic: Python Section syntax error
- Replies: 5
- Views: 16529
- Wed Feb 19, 2025 6:38 pm
- Forum: NEURON + Python
- Topic: Python Section syntax error
- Replies: 5
- Views: 16529
Re: Python Section syntax error
thank you for the reply, this is very insightful and resolves the issue with the syntax error Just for the records for all other users too: old code : spine_neck = h.Section(name= f''{sec}_spine_neck{i}') used to give a syntax error 1. If I use the following format (i.e. remove the {sec} in the of t...
- Tue Feb 11, 2025 1:52 pm
- Forum: NEURON + Python
- Topic: Python Section syntax error
- Replies: 5
- Views: 16529
Python Section syntax error
Hi All, I am working with NEURON via python and I import a morphology file via an .asc file. All good so far. My neurons has a soma, an axon and dend and apic sections amounting to 150 sections all together. I use python to create some new sections that I call spines and connect them to dend and api...
- Mon Feb 03, 2025 7:22 am
- Forum: NEURON + Python
- Topic: list the mechanisms loaded from the nrnmech.dll.file
- Replies: 3
- Views: 19230
Re: list the mechanisms loaded from the nrnmech.dll.file
It's not a good idea to do that, unless you enjoy setting booby traps for yourself and anyone who tries to reuse your code. Specification of the mechanisms used by a model should be made by hoc or Python statements. Hi Ted, thank you for your reply. I am not sure what you mean and why this is not a...
- Thu Jan 30, 2025 6:05 pm
- Forum: NEURON + Python
- Topic: list the mechanisms loaded from the nrnmech.dll.file
- Replies: 3
- Views: 19230
list the mechanisms loaded from the nrnmech.dll.file
Hi, I am working in python and I experience a number of issues. I would like to know how do I list the mechanisms that have been loaded in Neuron from the nrnmech.dll file...I would like to use these to load particular mechanisms in a multicompartment neuron. I know how to do the later but it seems ...