NEURON + Python

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Last post

how to install Python+NEURON in Windows

Last post by ted « Mon Oct 12, 2015 3:25 pm
Replies: 1
by breakwave922 » Thu Oct 08, 2015 12:40 am

1 Replies

4357 Views

Last post by ted
Mon Oct 12, 2015 3:25 pm
Patch to allow restore after recreating the geometry

Last post by jedlund « Wed Sep 30, 2015 7:38 pm
Replies: 4
by jedlund » Wed Sep 23, 2015 4:10 pm

4 Replies

5775 Views

Last post by jedlund
Wed Sep 30, 2015 7:38 pm
Monitoring injected current in a segment

Last post by hines « Thu Sep 17, 2015 9:38 am
Replies: 6
by dilawar » Tue May 05, 2015 8:05 am

6 Replies

6549 Views

Last post by hines
Thu Sep 17, 2015 9:38 am
Voltage output of cells in parallel python simulation

Last post by scienbox « Fri Aug 14, 2015 11:53 pm
Replies: 2
by scienbox » Thu Aug 13, 2015 7:05 pm

2 Replies

3744 Views

Last post by scienbox
Fri Aug 14, 2015 11:53 pm
Repeated Step Pulses In Python

Last post by Dmandel « Fri Aug 07, 2015 10:44 am
Replies: 14
by Dmandel » Thu Jul 23, 2015 4:37 pm

14 Replies

12272 Views

Last post by Dmandel
Fri Aug 07, 2015 10:44 am
NEURON simulation in Python using real time stimulus

Last post by ikasid15 « Mon Jul 27, 2015 12:21 pm

by ikasid15 » Mon Jul 27, 2015 12:21 pm

0 Replies

7477 Views

Last post by ikasid15
Mon Jul 27, 2015 12:21 pm
Recording the m,h,n gating variables

Last post by ted « Sun Jul 26, 2015 1:24 pm
Replies: 1
by Dmandel » Fri Jul 24, 2015 4:08 pm

1 Replies

5093 Views

Last post by ted
Sun Jul 26, 2015 1:24 pm
[Win64][7.4][Canopy] "dlopen failed" and python crash

Last post by hines « Wed Jul 22, 2015 9:47 am
Replies: 11
by CYUlysses » Sat Jul 04, 2015 5:12 pm

11 Replies

9835 Views

Last post by hines
Wed Jul 22, 2015 9:47 am
setpointer in Python

Last post by ted « Thu Jul 09, 2015 4:15 pm
Replies: 15
by tfoutz99 » Wed Jul 01, 2009 6:48 pm
1

2
15 Replies

25203 Views

Last post by ted
Thu Jul 09, 2015 4:15 pm
problem with conductance unit in NEURON

Last post by ted « Tue Jun 23, 2015 12:14 pm
Replies: 1
by xin » Tue Jun 23, 2015 10:12 am

1 Replies

3661 Views

Last post by ted
Tue Jun 23, 2015 12:14 pm
Accessing section type (or segment type) information

Last post by sgratiy « Thu Jun 18, 2015 3:37 pm

by sgratiy » Thu Jun 18, 2015 3:37 pm

0 Replies

4492 Views

Last post by sgratiy
Thu Jun 18, 2015 3:37 pm
Importing neuron module into Python

Last post by R_Jarvis « Mon May 18, 2015 9:05 pm
Replies: 26
by roybens » Mon Dec 15, 2014 3:21 pm
1

2
26 Replies

34290 Views

Last post by R_Jarvis
Mon May 18, 2015 9:05 pm
Can't delete point process after accessing range variable

Last post by hines « Mon May 04, 2015 7:05 pm
Replies: 2
by lcampagn » Mon Apr 20, 2015 3:02 pm

2 Replies

4283 Views

Last post by hines
Mon May 04, 2015 7:05 pm
Playing a vector into a linear mechanism from python

Last post by ted « Tue Apr 28, 2015 10:28 am
Replies: 4
by basjanzandt » Thu Apr 23, 2015 4:26 am

4 Replies

5657 Views

Last post by ted
Tue Apr 28, 2015 10:28 am
Error on loading the SWC file using neuron

Last post by ted « Sun Apr 26, 2015 5:25 pm
Replies: 2
by dilawar » Sat Apr 25, 2015 2:14 pm

2 Replies

4948 Views

Last post by ted
Sun Apr 26, 2015 5:25 pm
h.FInitializeHandler Crashing

Last post by bscoventry « Mon Mar 23, 2015 11:03 am
Replies: 5
by bscoventry » Tue Mar 17, 2015 11:17 am

5 Replies

5908 Views

Last post by bscoventry
Mon Mar 23, 2015 11:03 am
MWE for apparent bug discovered by PyNN format

Last post by Tom Close « Fri Mar 13, 2015 7:47 pm
Replies: 4
by Tom Close » Tue Mar 10, 2015 10:44 pm

4 Replies

7058 Views

Last post by Tom Close
Fri Mar 13, 2015 7:47 pm
SWC files

Last post by Kolorek « Tue Mar 10, 2015 5:37 pm
Replies: 33
by Kolorek » Mon Feb 02, 2015 5:26 am
1

2

3
33 Replies

54717 Views

Last post by Kolorek
Tue Mar 10, 2015 5:37 pm
substitute stadard init() precedure from Python

Last post by rth « Thu Feb 26, 2015 10:57 am
Replies: 2
by rth » Wed Feb 25, 2015 5:10 pm

2 Replies

5362 Views

Last post by rth
Thu Feb 26, 2015 10:57 am
Increase stacksize from python?

Last post by ramcdougal « Thu Feb 19, 2015 12:28 pm
Replies: 2
by aaronmil » Thu Feb 19, 2015 11:34 am

2 Replies

5370 Views

Last post by ramcdougal
Thu Feb 19, 2015 12:28 pm
Compiling NEURON/Python

Last post by bscoventry « Mon Feb 16, 2015 4:00 pm
Replies: 4
by bscoventry » Sun Feb 15, 2015 9:51 pm

4 Replies

5076 Views

Last post by bscoventry
Mon Feb 16, 2015 4:00 pm
Strange behavior Updating HOC Vectors inside Python+mpi deff

Last post by R_Jarvis « Mon Jan 26, 2015 7:27 pm
Replies: 3
by R_Jarvis » Thu Jan 22, 2015 8:31 pm

3 Replies

5154 Views

Last post by R_Jarvis
Mon Jan 26, 2015 7:27 pm
how to save a segment list in a pkl file

Last post by hines « Sat Jan 24, 2015 8:05 am
Replies: 2
by tine » Wed Jan 21, 2015 12:43 pm

2 Replies

5179 Views

Last post by hines
Sat Jan 24, 2015 8:05 am
Running multiple simulations in one process

Last post by hines « Wed Jan 07, 2015 1:20 am
Replies: 19
by lcampagn » Tue Oct 28, 2014 2:17 pm
1

2
19 Replies

40117 Views

Last post by hines
Wed Jan 07, 2015 1:20 am
record from one cell of a matrix to a vector

Last post by oren « Thu Dec 25, 2014 5:39 am
Replies: 4
by oren » Mon Dec 22, 2014 9:38 am

4 Replies

8773 Views

Last post by oren
Thu Dec 25, 2014 5:39 am
What sets the sys.path for nrniv -python?

Last post by hines « Sun Dec 14, 2014 12:56 am
Replies: 5
by aaronmil » Thu Dec 11, 2014 4:44 pm

5 Replies

7620 Views

Last post by hines
Sun Dec 14, 2014 12:56 am
generate dictionary of hoc (h.) things

Last post by wwlytton « Fri Nov 21, 2014 5:09 pm
Replies: 1
by wwlytton » Fri Nov 21, 2014 5:00 pm

1 Replies

5253 Views

Last post by wwlytton
Fri Nov 21, 2014 5:09 pm
Neuron and Python stim-response error

Last post by ted « Wed Nov 19, 2014 10:21 pm
Replies: 1
by tmczhangtielin » Wed Nov 19, 2014 10:42 am

1 Replies

3995 Views

Last post by ted
Wed Nov 19, 2014 10:21 pm
Bulletin Board Style

Last post by wwlytton « Thu Nov 13, 2014 10:10 am
Replies: 11
by Ruben Moor » Tue Nov 17, 2009 9:10 am

11 Replies

16865 Views

Last post by wwlytton
Thu Nov 13, 2014 10:10 am
Reference leak when using PointProcess.get_segment()

Last post by hines « Tue Nov 11, 2014 7:46 am
Replies: 1
by lcampagn » Sun Nov 09, 2014 7:12 pm

1 Replies

3802 Views

Last post by hines
Tue Nov 11, 2014 7:46 am
Setpointer when defining a synapse

Last post by Manni « Mon Nov 10, 2014 3:52 am
Replies: 2
by Manni » Thu Oct 30, 2014 10:14 am

2 Replies

6358 Views

Last post by Manni
Mon Nov 10, 2014 3:52 am
A pythonic API for NEURON

Last post by lcampagn « Mon Nov 03, 2014 12:31 pm
Replies: 2
by lcampagn » Tue Oct 28, 2014 1:44 pm

2 Replies

5343 Views

Last post by lcampagn
Mon Nov 03, 2014 12:31 pm
Confused about accessing segments in Python

Last post by lcampagn « Fri Oct 24, 2014 11:17 am
Replies: 2
by lcampagn » Thu Oct 23, 2014 3:09 pm

2 Replies

5251 Views

Last post by lcampagn
Fri Oct 24, 2014 11:17 am
Minor bug: uncaught python error condition

Last post by hines « Fri Oct 24, 2014 1:43 am
Replies: 1
by lcampagn » Thu Oct 23, 2014 2:43 pm

1 Replies

3514 Views

Last post by hines
Fri Oct 24, 2014 1:43 am
Simple function to add synapses

Last post by ahwillia « Fri Oct 17, 2014 2:00 am
Replies: 8
by ahwillia » Thu Oct 09, 2014 9:23 pm

8 Replies

11227 Views

Last post by ahwillia
Fri Oct 17, 2014 2:00 am
Accessing synapses on a section

Last post by sgratiy « Thu Oct 02, 2014 4:23 pm
Replies: 3
by sgratiy » Wed Oct 01, 2014 8:59 pm

3 Replies

5418 Views

Last post by sgratiy
Thu Oct 02, 2014 4:23 pm
Changing hoc variables after xopen but before instantiation

Last post by dopadelic « Sat Aug 09, 2014 8:20 pm
Replies: 3
by dopadelic » Thu Aug 07, 2014 6:13 pm

3 Replies

5911 Views

Last post by dopadelic
Sat Aug 09, 2014 8:20 pm
Section stack overflow

Last post by ted « Mon Aug 04, 2014 2:50 pm
Replies: 7
by ssalgado » Wed Jul 23, 2014 1:58 pm

7 Replies

10459 Views

Last post by ted
Mon Aug 04, 2014 2:50 pm
Neuron and Python, NetCon Error

Last post by tmczhangtielin « Sun Aug 03, 2014 8:53 am
Replies: 2
by tmczhangtielin » Sat Aug 02, 2014 12:13 pm

2 Replies

6001 Views

Last post by tmczhangtielin
Sun Aug 03, 2014 8:53 am
A Python interface for NEURON using ctypes

Last post by lcampagn « Mon Jul 07, 2014 8:43 pm
Replies: 2
by lcampagn » Mon Jul 07, 2014 6:19 pm

2 Replies

4863 Views

Last post by lcampagn
Mon Jul 07, 2014 8:43 pm
Playing vector into SEClamp

Last post by Tom Close « Sun Jun 29, 2014 5:35 am
Replies: 4
by tab » Mon Oct 28, 2013 3:26 pm

4 Replies

6382 Views

Last post by Tom Close
Sun Jun 29, 2014 5:35 am
Segfault when running long simulation with many neurons

Last post by ramcdougal « Thu Jun 26, 2014 4:29 pm
Replies: 3
by jgosmann » Wed Jun 25, 2014 12:35 pm

3 Replies

6169 Views

Last post by ramcdougal
Thu Jun 26, 2014 4:29 pm
to_python() causes big memory problems

Last post by hines « Thu Jun 19, 2014 10:47 am
Replies: 8
by arb » Wed Sep 17, 2008 5:43 pm

8 Replies

12790 Views

Last post by hines
Thu Jun 19, 2014 10:47 am
Creating an array of membrane currents

Last post by sgratiy « Mon Jun 16, 2014 4:09 pm
Replies: 8
by sgratiy » Tue Jun 10, 2014 1:14 pm

8 Replies

9860 Views

Last post by sgratiy
Mon Jun 16, 2014 4:09 pm
[PATCH] Fix nrnpython_getline signature

Last post by csh « Sat May 17, 2014 6:44 am

by csh » Sat May 17, 2014 6:44 am

0 Replies

5296 Views

Last post by csh
Sat May 17, 2014 6:44 am
Accessing segment area

Last post by sgratiy « Thu May 15, 2014 1:02 pm
Replies: 2
by sgratiy » Tue May 13, 2014 6:53 pm

2 Replies

5083 Views

Last post by sgratiy
Thu May 15, 2014 1:02 pm
Accessing all sections of a particular cell from a list

Last post by ted « Tue May 13, 2014 6:01 pm
Replies: 1
by sgratiy » Tue May 13, 2014 3:41 pm

1 Replies

5801 Views

Last post by ted
Tue May 13, 2014 6:01 pm
Cannot access range variable from external mechanism

Last post by sgratiy « Fri May 09, 2014 8:55 pm
Replies: 2
by sgratiy » Thu May 08, 2014 7:02 pm

2 Replies

4296 Views

Last post by sgratiy
Fri May 09, 2014 8:55 pm
creating independent instances of a cell object

Last post by hines « Fri May 09, 2014 2:46 pm
Replies: 1
by Nin » Fri May 09, 2014 8:39 am

1 Replies

3924 Views

Last post by hines
Fri May 09, 2014 2:46 pm
Having python read from a NEURON binary file

Last post by ted « Thu May 08, 2014 1:17 pm
Replies: 7
by Annik » Mon May 05, 2014 5:02 pm

7 Replies

9830 Views

Last post by ted
Thu May 08, 2014 1:17 pm

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