NEURON + Python

Moderator: hines

New Topic

412 topics

Page 1 of 9
- Jump to page:
1
2
3
4
5
…
9
Next

Topics

Replies

Views

Last post

Use NEURON's native GUI tools with Python!

Last post by ted « Fri Sep 27, 2019 11:23 am
Replies: 2
by ted » Tue Aug 08, 2017 2:48 pm

2 Replies

14975 Views

Last post by ted
Fri Sep 27, 2019 11:23 am
More NEURON + Python documentation

Last post by ramcdougal « Wed Oct 24, 2018 7:07 am
Replies: 6
by ted » Mon Mar 24, 2008 10:17 am

6 Replies

27662 Views

Last post by ramcdougal
Wed Oct 24, 2018 7:07 am
More NEURON + Python resources

Last post by wjbeaver « Wed Dec 22, 2010 4:38 pm
Replies: 4
by mctavish » Wed Dec 01, 2010 3:13 pm

4 Replies

18476 Views

Last post by wjbeaver
Wed Dec 22, 2010 4:38 pm
Mechanisms ignored when attempting to initialize events

Last post by ted « Tue May 24, 2022 12:14 pm
Replies: 1
by pacificmadrone » Thu May 12, 2022 2:55 pm

1 Replies

67 Views

Last post by ted
Tue May 24, 2022 12:14 pm
Uploading .swc file through .hoc

Last post by ted « Mon Apr 25, 2022 11:46 am
Replies: 3
by neuron121! » Sat Apr 02, 2022 2:13 pm

3 Replies

152 Views

Last post by ted
Mon Apr 25, 2022 11:46 am
Problem plotting PlotShape

Last post by ted « Tue Mar 22, 2022 12:02 pm
Replies: 7
by fvarkevisser » Thu Sep 23, 2021 10:53 am

7 Replies

643 Views

Last post by ted
Tue Mar 22, 2022 12:02 pm
IClamp and ImpedanceRatio in python

Last post by rmaina « Tue Feb 15, 2022 2:12 pm
Replies: 2
by rmaina » Fri Feb 11, 2022 12:46 pm

2 Replies

205 Views

Last post by rmaina
Tue Feb 15, 2022 2:12 pm
Shape plot update from Python

Last post by ted « Tue Feb 01, 2022 3:15 pm
Replies: 4
by ziemek » Mon Dec 02, 2019 1:22 pm

4 Replies

1636 Views

Last post by ted
Tue Feb 01, 2022 3:15 pm
Recording multiple netcon's weight with one synapse mechanism

Last post by ted « Fri Dec 31, 2021 11:11 am
Replies: 3
by dragon88hj » Thu Dec 30, 2021 1:58 am

3 Replies

212 Views

Last post by ted
Fri Dec 31, 2021 11:11 am
solving differential equation describing Vm

Last post by ted « Sat Dec 04, 2021 4:57 pm
Replies: 1
by finesniper » Fri Dec 03, 2021 5:07 pm

1 Replies

3257 Views

Last post by ted
Sat Dec 04, 2021 4:57 pm
hh.mod + Python + membrane potential at several points of the soma

Last post by ted « Tue Nov 16, 2021 12:01 pm
Replies: 5
by smetens » Wed Jun 09, 2021 11:09 am

5 Replies

1331 Views

Last post by ted
Tue Nov 16, 2021 12:01 pm
Time dependent NetCon weight

Last post by ted « Thu Nov 04, 2021 12:10 pm
Replies: 1
by ido4848 » Thu Nov 04, 2021 3:35 am

1 Replies

281 Views

Last post by ted
Thu Nov 04, 2021 12:10 pm
added a synapse with python

Last post by ted « Wed Nov 03, 2021 2:04 pm
Replies: 1
by OronKotler » Sun Oct 31, 2021 4:08 am

1 Replies

278 Views

Last post by ted
Wed Nov 03, 2021 2:04 pm
How to set spike detection threshold for pc.spike_record

Last post by Johannes « Thu Oct 14, 2021 9:40 am
Replies: 2
by Johannes » Wed Oct 13, 2021 6:03 am

2 Replies

3166 Views

Last post by Johannes
Thu Oct 14, 2021 9:40 am
Error running NEURON with embedded Python

Last post by ted « Wed Oct 13, 2021 12:37 pm
Replies: 3
by ttarnaud » Fri Dec 07, 2018 10:56 am

3 Replies

3762 Views

Last post by ted
Wed Oct 13, 2021 12:37 pm
problem instantiating a hoc template from python

Last post by ted « Sun Sep 19, 2021 1:25 am
Replies: 3
by alexandrapierri » Fri Sep 17, 2021 8:46 pm

3 Replies

488 Views

Last post by ted
Sun Sep 19, 2021 1:25 am
undefined symbol: nrnpython_start

Last post by Feanor « Fri Sep 17, 2021 10:57 am
Replies: 8
by Feanor » Mon Sep 13, 2021 4:25 pm

8 Replies

896 Views

Last post by Feanor
Fri Sep 17, 2021 10:57 am
Import3d tool via Jupyter

Last post by landoskape « Fri Aug 27, 2021 6:49 pm
Replies: 2
by landoskape » Thu Aug 12, 2021 11:37 am

2 Replies

509 Views

Last post by landoskape
Fri Aug 27, 2021 6:49 pm
Preproducing updating PlotShape() figures in

Last post by ramcdougal « Wed Jul 28, 2021 6:11 am
Replies: 1
by RBJ » Wed Jul 28, 2021 5:54 am

1 Replies

815 Views

Last post by ramcdougal
Wed Jul 28, 2021 6:11 am
Exporting .ses from Linear Circuit Builder

Last post by ted « Thu Jul 22, 2021 1:41 pm
Replies: 1
by ckelley » Mon Jul 19, 2021 1:02 pm

1 Replies

632 Views

Last post by ted
Thu Jul 22, 2021 1:41 pm
Using h.APCount with the extracellular mechanism

Last post by ted « Sat Jun 26, 2021 12:13 am
Replies: 1
by andrewq » Fri Jun 25, 2021 4:27 pm

1 Replies

441 Views

Last post by ted
Sat Jun 26, 2021 12:13 am
Why does this Python Hoc Cell Instantiation from Hoc with getattr() work after adding (morpho_path) behind.

Last post by watersun « Sun Jun 20, 2021 12:00 pm

by watersun » Sun Jun 20, 2021 12:00 pm

0 Replies

602 Views

Last post by watersun
Sun Jun 20, 2021 12:00 pm
silencing netstim during simulation.

Last post by alexandrapierri « Tue May 11, 2021 9:43 am
Replies: 2
by alexandrapierri » Mon May 10, 2021 9:51 pm

2 Replies

656 Views

Last post by alexandrapierri
Tue May 11, 2021 9:43 am
Correcting poor code design

Last post by ted « Mon May 03, 2021 4:05 pm
Replies: 3
by aliaped » Mon May 03, 2021 10:39 am

3 Replies

930 Views

Last post by ted
Mon May 03, 2021 4:05 pm
Assigning values to a mechanism over all sections in anatomically detailed model

Last post by aliaped « Mon Apr 26, 2021 10:25 am
Replies: 3
by aliaped » Mon Apr 12, 2021 10:30 am

3 Replies

838 Views

Last post by aliaped
Mon Apr 26, 2021 10:25 am
Simulation Setup when using a List of NetCons, VecStims and Exp2Syn for multiple spike train stimulation

Last post by ted « Thu Apr 15, 2021 5:41 pm
Replies: 3
by Liz_Stan_88 » Wed Apr 14, 2021 4:03 pm

3 Replies

976 Views

Last post by ted
Thu Apr 15, 2021 5:41 pm
Myelin modeling

Last post by ted « Wed Apr 14, 2021 11:54 am
Replies: 3
by OronKotler » Thu Mar 25, 2021 3:13 am

3 Replies

919 Views

Last post by ted
Wed Apr 14, 2021 11:54 am
Impulse Response for all locations

Last post by ted « Tue Apr 13, 2021 11:45 am
Replies: 1
by tmoldwin » Tue Apr 13, 2021 7:35 am

1 Replies

640 Views

Last post by ted
Tue Apr 13, 2021 11:45 am
initbatser.py

Last post by ted « Wed Mar 24, 2021 10:26 am
Replies: 3
by margo.k3008 » Tue Mar 23, 2021 1:44 pm

3 Replies

670 Views

Last post by ted
Wed Mar 24, 2021 10:26 am
Kernel dies in Jupyter notebook when attempting to import NEURON

Last post by ted « Thu Mar 18, 2021 12:06 pm
Replies: 3
by oitani » Mon Mar 15, 2021 5:57 pm

3 Replies

2701 Views

Last post by ted
Thu Mar 18, 2021 12:06 pm
hoc file is not a template

Last post by ted « Tue Mar 02, 2021 12:31 pm
Replies: 6
by alexandrapierri » Thu Feb 25, 2021 11:45 am

6 Replies

1048 Views

Last post by ted
Tue Mar 02, 2021 12:31 pm
Update to __init__.py?

Last post by ramcdougal « Mon Mar 01, 2021 2:15 pm
Replies: 1
by cvaaga » Mon Mar 01, 2021 1:55 pm

1 Replies

579 Views

Last post by ramcdougal
Mon Mar 01, 2021 2:15 pm
Save data from a loop in data acquired from neuron

Last post by ted « Wed Feb 24, 2021 10:50 am
Replies: 1
by OronKotler » Wed Feb 24, 2021 8:51 am

1 Replies

550 Views

Last post by ted
Wed Feb 24, 2021 10:50 am
Mechanisms in nrnmech.dll do not seem to be loading in python script

Last post by ted « Wed Feb 10, 2021 9:59 am
Replies: 5
by Liz_Stan_88 » Tue Feb 09, 2021 11:22 am

5 Replies

1379 Views

Last post by ted
Wed Feb 10, 2021 9:59 am
Record and fadvance instead of run

Last post by fkolbl « Thu Dec 31, 2020 11:23 am
Replies: 2
by fkolbl » Wed Dec 30, 2020 2:41 pm

2 Replies

958 Views

Last post by fkolbl
Thu Dec 31, 2020 11:23 am
Recording voltage across elements and using external stim Linear Circuit Builder

Last post by ted « Mon Nov 23, 2020 5:39 pm
Replies: 1
by ckelley » Fri Nov 20, 2020 3:28 pm

1 Replies

863 Views

Last post by ted
Mon Nov 23, 2020 5:39 pm
Modelling of subcellular signalling

Last post by ted « Wed Nov 18, 2020 10:42 pm
Replies: 1
by jofrony » Wed Nov 18, 2020 1:25 pm

1 Replies

711 Views

Last post by ted
Wed Nov 18, 2020 10:42 pm
External Stimuli not working

Last post by ted « Fri Oct 02, 2020 11:25 am
Replies: 1
by gladonias » Mon Aug 17, 2020 6:38 am

1 Replies

1502 Views

Last post by ted
Fri Oct 02, 2020 11:25 am
implement Randles circuit in NEURON

Last post by breakwave922 « Wed Sep 30, 2020 2:36 pm
Replies: 3
by breakwave922 » Tue Sep 29, 2020 6:52 pm

3 Replies

1111 Views

Last post by breakwave922
Wed Sep 30, 2020 2:36 pm
cell counting on an image with python

Last post by gladonias « Thu Sep 17, 2020 11:34 am
Replies: 4
by fpointeau » Mon Apr 13, 2020 11:54 am

4 Replies

3195 Views

Last post by gladonias
Thu Sep 17, 2020 11:34 am
Connect multiple cells using connection probabilities

Last post by gladonias « Thu Sep 17, 2020 11:26 am
Replies: 4
by ekkya » Sat Mar 03, 2018 10:15 am

4 Replies

5327 Views

Last post by gladonias
Thu Sep 17, 2020 11:26 am
Frequency dependent activation of g protein models

Last post by ted « Mon Sep 14, 2020 3:17 pm
Replies: 2
by jofrony » Tue Nov 12, 2019 6:20 am

2 Replies

4697 Views

Last post by ted
Mon Sep 14, 2020 3:17 pm
injecting continuous normally distributed noise in python

Last post by ted « Mon Sep 14, 2020 3:10 pm
Replies: 2
by thiank » Sun Aug 25, 2019 10:57 pm

2 Replies

2086 Views

Last post by ted
Mon Sep 14, 2020 3:10 pm
Netstim in automated repeating simulations

Last post by breakwave922 « Mon Sep 14, 2020 2:20 pm
Replies: 2
by breakwave922 » Sun Sep 13, 2020 12:52 am

2 Replies

1045 Views

Last post by breakwave922
Mon Sep 14, 2020 2:20 pm
Multiple stimulation of POINT_PROCESS per run

Last post by ted « Tue Sep 08, 2020 5:07 pm
Replies: 3
by parent41 » Thu Aug 06, 2020 11:12 am

3 Replies

1216 Views

Last post by ted
Tue Sep 08, 2020 5:07 pm
Ephaptic coupling of Axons

Last post by ted « Mon Aug 03, 2020 11:32 pm
Replies: 1
by subash774 » Mon Aug 03, 2020 4:50 pm

1 Replies

927 Views

Last post by ted
Mon Aug 03, 2020 11:32 pm
Is it possible to track "value explosions" and out of range errors

Last post by hines « Tue Jul 28, 2020 4:47 pm
Replies: 2
by duytanph » Thu Jul 23, 2020 9:43 pm

2 Replies

1042 Views

Last post by hines
Tue Jul 28, 2020 4:47 pm
Modelling a chain of HH cell with myelinated axon

Last post by subash774 « Tue Jul 28, 2020 9:02 am
Replies: 16
by subash774 » Mon Jul 20, 2020 7:37 am
1

2
16 Replies

3534 Views

Last post by subash774
Tue Jul 28, 2020 9:02 am
color or color_list procedures in PlotShape

Last post by roybens « Tue Jul 21, 2020 12:40 pm
Replies: 5
by roybens » Mon Jul 06, 2020 4:58 pm

5 Replies

1703 Views

Last post by roybens
Tue Jul 21, 2020 12:40 pm
Does the usage of the Shape may affect mV readouts?

Last post by ziemek « Sat Jul 18, 2020 3:34 pm
Replies: 5
by ziemek » Mon Jun 29, 2020 6:29 am

5 Replies

1483 Views

Last post by ziemek
Sat Jul 18, 2020 3:34 pm

New Topic

412 topics

Page 1 of 9
- Jump to page:
1
2
3
4
5
…
9
Next

Return to Board Index

Forum permissions

You cannot post new topics in this forum
You cannot reply to topics in this forum
You cannot edit your posts in this forum
You cannot delete your posts in this forum