Search found 18 matches

by samnemo
Sat Dec 14, 2013 11:15 am
Forum: NEURON + Python
Topic: nrnpython+matplotlib gui thread hangs
Replies: 1
Views: 5026

nrnpython+matplotlib gui thread hangs

I'm having some issues using matplotlib plots from the hoc side with nrnpython due to threading issues. The problem is that the matplotlib gui thread seems to prevent response from the hoc interpreter. Previously, the code sequence below was effective in dealing with this issue (similar to ipython i...
by samnemo
Mon Oct 28, 2013 12:13 pm
Forum: Specific models
Topic: X-axis changes scale when adding color to plot
Replies: 2
Views: 29816

Re: X-axis changes scale when adding color to plot

Hi Sanjay, You just need to pass the correct arguments to the Vector plot function. Here are the docs for that: http://www.neuron.yale.edu/neuron/static/new_doc/programming/math/vector.html#Vector.plot Since you want to specify a dt and a color you'll have to use this call: vec.plot(graphobj, x_incr...
by samnemo
Tue Jun 26, 2012 1:39 pm
Forum: NEURON + Python
Topic: python & hoc strings
Replies: 1
Views: 14242

python & hoc strings

I am trying to modify a hoc string from within a mod file (strtest.mod code below) and want to be able to do this using both hoc and python. When I call the code in test.py there's no error when running using NEURON h(command) syntax, but when using h.variablename syntax, I get an error. Although th...