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I haven't solved the above problem with restoring synapses, but I did discover that you can install them after a restore by calling finitialize() after the restore. I developed 2 examples and emailed them to Robert. SimpleModelSaveToFile.py demonstrates one way of running a geometry to steady state,...

After having problems with the above patch and ExpSyn, I went back to the standard neuron 7.4 and tried: 1. create a geometry 2. install a synapse (set to fire at 410 ms) 3. ran the simulation for 400ms 4. save the state to disk 5. finish the simulation (synapse fires fine) 6. Steps 1 and 2 again 7....

This patch might not be as useful as I thought. Here's the basic outline of what I was attempting: 1. Create neuron geometry (without extracellular fields, iclamps, or synapses) 2. Run the simulation to a steady state 3. Save the state in memory 4. Destroy the neuron geometry 5. Create neuron geomet...

When running multiple simulations on the same geometry (with different extracellular fields and/or synapse weights, etc) it's useful to be able to run the simulation to steady state, save the state of the sections, and then use this saved state to start new simulations after recreating the exact sam...

I have a couple of questions about this model. After reading the FAQ I ran modlunit on the AXNODE.mod before compiling it. ~/Downloads/NEURON/MRGaxon$ modlunit AXNODE.mod model 1.1.1.1 1994/10/12 17:22:51 Checking units of AXNODE.mod units: 1 units: 1000 /sec The units of the previous two expression...