NetPyNE hanging with MPI

A Python package that facilitates development and use of models of biological neural networks

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pascal
Posts: 106
Joined: Thu Apr 26, 2012 11:51 am

NetPyNE hanging with MPI

Post by pascal »

I am just starting out with Netpyne (though I have used NEURON for quite some time). I just installed NetPyNE on my Windows machine, and I successfully ran tut1.py in serial (from http://www.netpyne.org/tutorial.html). However, when I ran it with MPI, it generated all the same output files and seemed to be successful, *except* for the fact that it just hung in the command window and never completed. I had to Control-C to kill the process, after which point it generated all the text about analyzing, saving output files, plotting, etc.

Any idea what I can do so that it finishes successfully? I have no problem running my NEURON code with MPI. Thank you.
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