After updating to MacOS 12.3 Monterey
Posted: Thu Mar 24, 2022 5:57 pm
Hi,
I'm getting the following error since updating to MacOS 12.3 and also after reinstalling NEURON on my computer. Any insight on this would be appreciated.
Thank you
I'm getting the following error since updating to MacOS 12.3 and also after reinstalling NEURON on my computer. Any insight on this would be appreciated.
Thank you
Code: Select all
ImportError Traceback (most recent call last)
/Applications/NEURON/lib/python/neuron/__init__.py in <module>
134 try:
--> 135 from . import hoc
136 except:
ImportError: cannot import name 'hoc' from 'neuron' (/Applications/NEURON/lib/python/neuron/__init__.py)
During handling of the above exception, another exception occurred:
ModuleNotFoundError Traceback (most recent call last)
<ipython-input-1-62766daa135f> in <module>
----> 1 from netpyne import specs, sim
2 get_ipython().run_line_magic('matplotlib', 'inline')
3 import numpy as np
4 import matplotlib.pyplot as plt
5
/Applications/anaconda3/lib/python3.7/site-packages/netpyne/__init__.py in <module>
19 matplotlib.use('Agg')
20
---> 21 from netpyne import analysis
22 from netpyne import batch
23 from netpyne import cell
/Applications/anaconda3/lib/python3.7/site-packages/netpyne/analysis/__init__.py in <module>
34 # Import spike-related functions
35 # -------------------------------------------------------------------------------------------------------------------
---> 36 from .spikes import calculateRate, plotRates, plotSyncs, plotRaster, plotSpikeHist, plotSpikeStats, \
37 plotRatePSD, plotRateSpectrogram, popAvgRates, plotfI
38
/Applications/anaconda3/lib/python3.7/site-packages/netpyne/analysis/spikes.py in <module>
30 import pandas as pd
31 import scipy
---> 32 from ..specs import Dict
33 from .utils import colorList, exception, getCellsInclude, getSpktSpkid, _showFigure, _saveFigData, syncMeasure, _smooth1d
34
/Applications/anaconda3/lib/python3.7/site-packages/netpyne/specs/__init__.py in <module>
11 standard_library.install_aliases()
12 from .dicts import Dict, ODict
---> 13 from .netParams import NetParams, CellParams
14 from .simConfig import SimConfig
/Applications/anaconda3/lib/python3.7/site-packages/netpyne/specs/netParams.py in <module>
24 from collections import OrderedDict
25 from .dicts import Dict, ODict
---> 26 from .. import conversion
27
28 # ----------------------------------------------------------------------------
/Applications/anaconda3/lib/python3.7/site-packages/netpyne/conversion/__init__.py in <module>
10 standard_library.install_aliases()
11
---> 12 from .neuronPyHoc import importCell, importCellsFromNet, mechVarList, getSecName
13 from .pythonScript import createPythonScript
14 from .excel import importConnFromExcel
/Applications/anaconda3/lib/python3.7/site-packages/netpyne/conversion/neuronPyHoc.py in <module>
18 import os, sys, signal
19 from numbers import Number
---> 20 from neuron import h
21 import importlib
22
/Applications/NEURON/lib/python/neuron/__init__.py in <module>
135 from . import hoc
136 except:
--> 137 import neuron.hoc
138
139 import nrn
ModuleNotFoundError: No module named 'neuron.hoc'