Learning by recreating the HH model
Posted: Thu May 20, 2021 2:41 pm
I'm new to NEURON, trying to work my way through the book, and starting off by recreating the Hodgkin-Huxley model. This includes setting up a set of new mechanisms, getting the setting right and everything as much from scratch as I can.
1. sometimes things I build don't always match the output of NEURON's stock HH mechanism. How do I "lift the hood" and see what those built-in HH settings are?
2. How is temperature a part of model building in NEURON? I found the Celsius variable (and later the Temperature panel), and can enable resetting with ion_style()...but should I be adjusting temp through changing the rate constants instead instead of this seemingly global temp variable?
1. sometimes things I build don't always match the output of NEURON's stock HH mechanism. How do I "lift the hood" and see what those built-in HH settings are?
2. How is temperature a part of model building in NEURON? I found the Celsius variable (and later the Temperature panel), and can enable resetting with ion_style()...but should I be adjusting temp through changing the rate constants instead instead of this seemingly global temp variable?