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Flushing Output to Disk

Posted: Thu Nov 12, 2020 11:46 am
by tiki
I am using NEURON in python to simulate large groups of endocrine cells (often over 100 cells per simulation). Naturally, keeping a copy of all the variables of interest in python (as seen in step 6 here: https://www.neuron.yale.edu/neuron/docs ... ron-basics) is taking a lot of memory and I was curious whether NEURON kept a reference to whatever data structure this information was kept in that I could access at the end of my script or if it was possible to periodically flush the recorded data to an output file.

Re: Flushing Output to Disk

Posted: Thu Nov 12, 2020 4:53 pm
by ted
Look in the Hot tips area of the Forum for Simulations that generate lots of data