Cell Builder Output --> Procedure too big
Posted: Thu Feb 14, 2013 4:55 am
Hello!
I am using Neuron to create a model of electroporated cells, which I have reconstructed using AMIRA software. I am loading the reconstructed neurones into the CellBuilder and assign different subsections and biophysical parameters. When I am trying to export the neurone to .hoc, I cannot execute the procedure because there is an error message that the procedure is too big. I read in this forum that in this case, the procedure must be broken up into several smaller procedures, however this is difficult to realise in the output code from the cell builder (at least I have not succeeded so far), because it is not so well structured. Is there a way to tell the Cell Builder to create several small procedures initially? This would save me so much work, going through each of these long .hoc files, trying to split them.
Thank you very much in advance for your answer.
Best wishes,
Barbara
I am using Neuron to create a model of electroporated cells, which I have reconstructed using AMIRA software. I am loading the reconstructed neurones into the CellBuilder and assign different subsections and biophysical parameters. When I am trying to export the neurone to .hoc, I cannot execute the procedure because there is an error message that the procedure is too big. I read in this forum that in this case, the procedure must be broken up into several smaller procedures, however this is difficult to realise in the output code from the cell builder (at least I have not succeeded so far), because it is not so well structured. Is there a way to tell the Cell Builder to create several small procedures initially? This would save me so much work, going through each of these long .hoc files, trying to split them.
Thank you very much in advance for your answer.
Best wishes,
Barbara