Re: Spike source and target sections
Posted: Sun Mar 25, 2018 7:34 am
Hi Salvador.
I'm checking that everything, so far, is correct but, looking at the complete output, i saw something strange:
Created connection preGid=0, postGid=1, sec=dend_0, loc=0.7421, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_0, loc=0.2263, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_1, loc=0.8218, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_1, loc=0.5042, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_1, loc=0.1866, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_2, loc=0.5578, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_3, loc=0.08891, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_4, loc=0.146, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_6, loc=0.7226, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_7, loc=0.4523, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_8, loc=0.6848, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_8, loc=0.04196, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_10, loc=0.4802, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Counting all the lines are exactly 105 connections, as defined in the seclist and in synsPerConn, but there are repeated sec name and sec missing.
The sec locations, instead, are all different, so i can think that is only a name problem, since the physiological response is correct.
The section list i'm passing does never repeat but it has some gaps after the first 70 values.
cf_dend = ['dend_0', 'dend_1', 'dend_2', 'dend_3', 'dend_4', 'dend_5', 'dend_6', 'dend_7', 'dend_8', 'dend_9', 'dend_10', etc...]
Best
Stefano
I'm checking that everything, so far, is correct but, looking at the complete output, i saw something strange:
Created connection preGid=0, postGid=1, sec=dend_0, loc=0.7421, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_0, loc=0.2263, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_1, loc=0.8218, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_1, loc=0.5042, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_1, loc=0.1866, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_2, loc=0.5578, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_3, loc=0.08891, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_4, loc=0.146, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_6, loc=0.7226, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_7, loc=0.4523, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_8, loc=0.6848, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_8, loc=0.04196, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Created connection preGid=0, postGid=1, sec=dend_10, loc=0.4802, synMech=CF_AMPA, weight=1, delay=1.00, threshold=10
Counting all the lines are exactly 105 connections, as defined in the seclist and in synsPerConn, but there are repeated sec name and sec missing.
The sec locations, instead, are all different, so i can think that is only a name problem, since the physiological response is correct.
The section list i'm passing does never repeat but it has some gaps after the first 70 values.
cf_dend = ['dend_0', 'dend_1', 'dend_2', 'dend_3', 'dend_4', 'dend_5', 'dend_6', 'dend_7', 'dend_8', 'dend_9', 'dend_10', etc...]
Best
Stefano