This post is relevant if you used a cygwin-based NEURON installer, which includes an rxvt terminal. If you used a MinGW-based installer, you'll want to read about the bash shell window that comes with that package.
The rxvt shell window (launched by clicking on the rxvt sh icon in the NEURON Program Group) is pretty slick--it gives MSWin users access to a few very nice utilities. It's nowhere near as complete as you'd get by installing cygwin, or running UNIX/Linux/OS X, but even a few nice features and utilities is better than what Microsoft gives you.
So open an rxvt window, then at the command line type
and you'll get this response:
will show all the stuff at the root of c:
shows all the stuff at the root of d:
Tab completion works, which saves a lot of typing when doing cd or typing a long file name.
shows all the executables that come with NEURON. Notice that these include
which can be very helpful indeed.
and you get
grep load_file *hoc
shows all the files in the current directory that contain load_file
checks filename.hoc for consistent units.
compiles the mod files in the current directory and generates a dll.
captures stderr to errmsg.txt (after all, this is a bash shell), so you can review it later. Very helpful when you are trying to see if any of your mod files are not threadsafe.
starts NEURON sans its GUI, at which point entering the command
at the oc> prompt puts you in MicroEMACS (which is excellent if you're a MicroEMACS fan).
For an example of how to use the shell to execute batch runs, see
Automating tasks: -c "statement" and batch runs
http://www.neuron.yale.edu/phpBB/viewto ... =28&t=1747
A collection of noteworthy items selected by our moderators from discussions about making and using models with NEURON.
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