Model (hoc file), plotting output in Python

When Python is the interpreter, what is a good
design for the interface to the basic NEURON
concepts.

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mattions
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Joined: Tue Jul 15, 2008 11:21 am
Location: EMBL-EBI Cambridge UK

Re: Model (hoc file), plotting output in Python

Post by mattions » Sun Jul 15, 2012 2:36 pm

Well there are three more things, which are also written in the paper, which are:

1. the integration with ModelDB, which makes super easy to download, compile and run any model which has been uploaded to ModelDB. If the model provides a mosinit, it just runs out of the box

2. The integration with matplotlib. Plotting the vectors just create a standard matplotlib figure, which then can be altered/changed with standard matplotlib commands

3. the HDF storage, which make quite easy to run a simulation and store all the detail, with the model, in one single file.

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