NEURON installation and configuration

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OS X
Topics: 145

145 Topics

866 Posts

Last post Re: NEURON 8.2 install / OS X…
by hines View the latest post
Thu Jan 23, 2025 7:45 am
MSWin
Topics: 142

142 Topics

816 Posts

Last post Re: Python cannot import neur…
by hines View the latest post
Tue Oct 22, 2024 1:38 pm
UNIX/Linux
Topics: 195

195 Topics

879 Posts

Last post Re: Flags to enable Avx256 an…
by bremen View the latest post
Thu Oct 24, 2024 2:50 am

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If you can't compile mod files . . .

Last post by LN_philippe « Fri Apr 16, 2021 2:06 pm
Replies: 26
by ted » Tue Aug 18, 2009 12:25 am
1

2
26 Replies

121007 Views

Last post by LN_philippe
Fri Apr 16, 2021 2:06 pm
NEURON 8.2 install / OS X 15.2 Sequoia / Python 3.12.7 Anaconda installation difficulties

Last post by hines « Thu Jan 23, 2025 7:45 am
Replies: 3
by pjthomas » Mon Jan 20, 2025 10:54 pm

3 Replies

18160 Views

Last post by hines
Thu Jan 23, 2025 7:45 am
Flags to enable Avx256 and 512 compiling

Last post by bremen « Thu Oct 24, 2024 2:50 am
Replies: 3
by bremen » Wed Oct 16, 2024 8:52 am

3 Replies

17957 Views

Last post by bremen
Thu Oct 24, 2024 2:50 am
Python cannot import neuron library on Windows install

Last post by hines « Tue Oct 22, 2024 1:38 pm
Replies: 9
by pascal » Wed Jul 26, 2023 5:28 pm

9 Replies

58055 Views

Last post by hines
Tue Oct 22, 2024 1:38 pm
NEURON cann't open hoc

Last post by liqiang « Fri Sep 27, 2024 9:29 pm
Replies: 5
by liqiang » Wed Sep 25, 2024 11:10 pm

5 Replies

13111 Views

Last post by liqiang
Fri Sep 27, 2024 9:29 pm
os.execv

Last post by hines « Wed Sep 25, 2024 9:59 am
Replies: 8
by pfortier » Sun Sep 22, 2024 5:47 pm

8 Replies

15297 Views

Last post by hines
Wed Sep 25, 2024 9:59 am
error creating nrnmech.dll modeldb 195615 with python

Last post by mahtah « Fri Aug 02, 2024 6:01 am
Replies: 6
by mahtah » Tue Jul 30, 2024 3:19 pm

6 Replies

14835 Views

Last post by mahtah
Fri Aug 02, 2024 6:01 am
Python/Neuron model runs on Windows but does not on Linux.(h.finitialize)

Last post by hines « Wed Jul 31, 2024 11:50 am
Replies: 1
by Cbswimmer23 » Mon Jul 22, 2024 12:08 pm

1 Replies

14612 Views

Last post by hines
Wed Jul 31, 2024 11:50 am
undefined reference to ‘memcpy@GLIBC_2.1’ compiling error

Last post by kedoxey « Fri Jun 28, 2024 2:52 pm
Replies: 9
by kedoxey » Tue Jun 25, 2024 4:31 pm

9 Replies

25143 Views

Last post by kedoxey
Fri Jun 28, 2024 2:52 pm
NEURON-nightly and compiling mod files

Last post by ted « Thu Jun 13, 2024 10:51 am
Replies: 1
by jared » Tue Jun 11, 2024 1:56 pm

1 Replies

22834 Views

Last post by ted
Thu Jun 13, 2024 10:51 am
loading a model into neutron

Last post by ted « Thu Mar 21, 2024 11:46 am
Replies: 1
by Chloe » Wed Mar 20, 2024 11:12 pm

1 Replies

16138 Views

Last post by ted
Thu Mar 21, 2024 11:46 am
can't open DISPLAY

Last post by hines « Thu Feb 22, 2024 9:35 am
Replies: 14
by fietkiewicz » Mon Feb 19, 2024 9:52 pm

14 Replies

31415 Views

Last post by hines
Thu Feb 22, 2024 9:35 am
New installation of NEURON + Python

Last post by ted « Fri Oct 06, 2023 1:01 pm
Replies: 4
by bril27 » Sun Aug 06, 2023 11:43 pm

4 Replies

58396 Views

Last post by ted
Fri Oct 06, 2023 1:01 pm
Compiling Pulse Generator Error

Last post by ted « Tue Sep 12, 2023 3:34 pm
Replies: 1
by dhruskar » Tue Sep 12, 2023 10:55 am

1 Replies

46731 Views

Last post by ted
Tue Sep 12, 2023 3:34 pm
MSWin11 + Anaconda, Neuron 8.2.2

Last post by hines « Wed Aug 30, 2023 4:35 pm
Replies: 6
by maciejkasprzycki » Mon Aug 21, 2023 7:20 am

6 Replies

40822 Views

Last post by hines
Wed Aug 30, 2023 4:35 pm
" HHna is not a MECHANISM "

Last post by ted « Thu Aug 24, 2023 12:17 pm
Replies: 5
by CleoHuhuihan » Tue Aug 22, 2023 10:37 am

5 Replies

34615 Views

Last post by ted
Thu Aug 24, 2023 12:17 pm
Nemo-TMS model generation failure

Last post by ted « Wed Jul 12, 2023 3:49 pm
Replies: 6
by kennelly25 » Tue Jul 11, 2023 2:38 pm

6 Replies

35578 Views

Last post by ted
Wed Jul 12, 2023 3:49 pm
configuring neuron on a cluster with a local install of python - and getting it to use that python with nrniv -python

Last post by countfizix « Fri Jun 09, 2023 3:57 pm
Replies: 3
by countfizix » Thu Jun 01, 2023 3:06 pm

3 Replies

57174 Views

Last post by countfizix
Fri Jun 09, 2023 3:57 pm
NEURON crashes in Windows 11

Last post by rennerm « Tue May 09, 2023 4:01 pm
Replies: 4
by rennerm » Thu Apr 27, 2023 2:43 pm

4 Replies

32875 Views

Last post by rennerm
Tue May 09, 2023 4:01 pm
Ventura 13.2.1 and NEURON

Last post by salvoj « Wed Apr 19, 2023 4:26 am
Replies: 2
by salvoj » Tue Apr 18, 2023 6:56 am

2 Replies

33186 Views

Last post by salvoj
Wed Apr 19, 2023 4:26 am
[SOLVED] Unable to run nrniv -python with NEURON 8.0.0 installed via pip

Last post by silvan « Tue Nov 15, 2022 12:37 pm
Replies: 6
by silvan » Mon Nov 14, 2022 1:26 pm

6 Replies

38654 Views

Last post by silvan
Tue Nov 15, 2022 12:37 pm
bash:........bad interepter. no such file or directory

Last post by cassiehu « Wed Sep 21, 2022 6:34 am
Replies: 12
by cassiehu » Sat Sep 17, 2022 9:20 am

12 Replies

47187 Views

Last post by cassiehu
Wed Sep 21, 2022 6:34 am
nrngui not opening main menu GUI on startup on M1 Mac

Last post by hines « Sat Sep 17, 2022 3:26 pm
Replies: 13
by was2be » Sun Nov 07, 2021 8:21 pm

13 Replies

51282 Views

Last post by hines
Sat Sep 17, 2022 3:26 pm
Error after install NEURON 8 using rxd

Last post by neuron121! « Wed Jul 27, 2022 12:34 pm
Replies: 4
by RBJ » Wed Feb 09, 2022 8:03 am

4 Replies

35293 Views

Last post by neuron121!
Wed Jul 27, 2022 12:34 pm
Can't Load .mod files in Python Script

Last post by ted « Wed Jul 20, 2022 6:28 pm
Replies: 4
by Liz_Stan_88 » Wed Jul 20, 2022 9:27 am

4 Replies

36297 Views

Last post by ted
Wed Jul 20, 2022 6:28 pm
Insert Mechanisms in Matlab

Last post by ted « Mon Jul 18, 2022 4:59 pm
Replies: 1
by chrysatbr » Mon Jul 18, 2022 11:21 am

1 Replies

30674 Views

Last post by ted
Mon Jul 18, 2022 4:59 pm
Bad xdarwin link in troubleshooting tip

Last post by ted « Tue Jun 07, 2022 2:28 pm
Replies: 1
by fietkiewicz » Tue Jun 07, 2022 12:11 pm

1 Replies

32204 Views

Last post by ted
Tue Jun 07, 2022 2:28 pm
NEURON 7.6.7 - Permission denied. Python not available.

Last post by AnaLuis « Fri May 20, 2022 9:58 am
Replies: 21
by AnaLuis » Mon May 16, 2022 12:16 pm
1

2
21 Replies

84513 Views

Last post by AnaLuis
Fri May 20, 2022 9:58 am
MacOS 12.3; Application "Terminal" can't be opened. -1703

Last post by hines « Sat Mar 19, 2022 1:04 pm
Replies: 4
by was2be » Tue Mar 15, 2022 10:47 am

4 Replies

36653 Views

Last post by hines
Sat Mar 19, 2022 1:04 pm
PyCharm "ModuleNotFoundError: No module named 'neuron'"

Last post by RBJ « Thu Feb 10, 2022 6:57 am
Replies: 1
by sangwonc » Mon Jan 24, 2022 2:43 am

1 Replies

34654 Views

Last post by RBJ
Thu Feb 10, 2022 6:57 am
Intel MKL Fatal error when executing HOC file

Last post by hines « Wed Nov 17, 2021 8:12 pm
Replies: 7
by sangwonc » Mon Nov 08, 2021 11:10 pm

7 Replies

50241 Views

Last post by hines
Wed Nov 17, 2021 8:12 pm
Unable to build NEURON v8 with CoreNeuron and GPU support

Last post by deka10 « Sat Jun 05, 2021 9:36 am
Replies: 4
by deka10 » Tue Jun 01, 2021 1:20 pm

4 Replies

38984 Views

Last post by deka10
Sat Jun 05, 2021 9:36 am
Gui Freezing

Last post by ted « Fri Apr 02, 2021 12:10 pm
Replies: 5
by LauraD » Wed Oct 21, 2020 8:32 pm

5 Replies

39713 Views

Last post by ted
Fri Apr 02, 2021 12:10 pm
NEURON on ARM M1, Big Sur and Rosetta

Last post by watersun « Thu Apr 01, 2021 4:28 pm
Replies: 4
by watersun » Tue Dec 01, 2020 8:32 am

4 Replies

37310 Views

Last post by watersun
Thu Apr 01, 2021 4:28 pm
OpenMP based parallelism in NEURON

Last post by pkumbhar « Wed Feb 17, 2021 10:37 am
Replies: 1
by itaru » Fri May 15, 2020 1:05 am

1 Replies

39213 Views

Last post by pkumbhar
Wed Feb 17, 2021 10:37 am
Issues with Anaconda install

Last post by Leam « Tue Feb 09, 2021 9:01 am
Replies: 2
by Leam » Mon Jan 25, 2021 12:19 pm

2 Replies

36980 Views

Last post by Leam
Tue Feb 09, 2021 9:01 am
Compiling mod files

Last post by ted « Wed Dec 23, 2020 1:36 pm
Replies: 1
by vreddy20 » Mon Dec 21, 2020 4:38 pm

1 Replies

33502 Views

Last post by ted
Wed Dec 23, 2020 1:36 pm
Unable to find Import3d_Neurolucida3

Last post by NickHananeia « Fri Dec 11, 2020 2:48 pm
Replies: 4
by NickHananeia » Wed Dec 09, 2020 11:51 am

4 Replies

36726 Views

Last post by NickHananeia
Fri Dec 11, 2020 2:48 pm
Compiling script fails with newer NEURON versions due to $N

Last post by Mohamed_Hisham « Sun Nov 15, 2020 2:34 pm
Replies: 6
by MBeining » Sun May 26, 2019 5:26 am

6 Replies

41697 Views

Last post by Mohamed_Hisham
Sun Nov 15, 2020 2:34 pm
Program editors for OS X

Last post by SurG « Thu Nov 12, 2020 5:58 pm
Replies: 8
by ted » Thu May 03, 2007 6:34 pm

8 Replies

53765 Views

Last post by SurG
Thu Nov 12, 2020 5:58 pm
Installing on Ubuntu 20.04 (GUI not working)

Last post by hines « Thu Oct 22, 2020 5:25 pm
Replies: 7
by sohaib786 » Sun Oct 04, 2020 8:22 am

7 Replies

41067 Views

Last post by hines
Thu Oct 22, 2020 5:25 pm
Configure fonts, etc in GUI

Last post by mattnolan « Thu Oct 01, 2020 4:12 am
Replies: 2
by mattnolan » Wed Sep 30, 2020 4:25 pm

2 Replies

33926 Views

Last post by mattnolan
Thu Oct 01, 2020 4:12 am
DLL LOAD FAILED importing python packages from anaconda into neuron

Last post by ted « Mon Aug 17, 2020 11:14 am
Replies: 1
by aliaped » Thu Aug 13, 2020 10:32 am

1 Replies

35174 Views

Last post by ted
Mon Aug 17, 2020 11:14 am
DLL load failed in Windows10

Last post by kazutaka « Mon Aug 17, 2020 8:03 am
Replies: 4
by kazutaka » Sun Aug 09, 2020 8:52 pm

4 Replies

37177 Views

Last post by kazutaka
Mon Aug 17, 2020 8:03 am
.mod files compilation issues

Last post by mmushtaq « Mon Jun 08, 2020 4:25 am
Replies: 4
by mmushtaq » Thu Jun 04, 2020 8:37 am

4 Replies

39917 Views

Last post by mmushtaq
Mon Jun 08, 2020 4:25 am
Windows 10, Permission Denied

Last post by ramcdougal « Sun Jun 07, 2020 5:41 pm
Replies: 1
by n74jw » Fri Jun 05, 2020 5:57 pm

1 Replies

35794 Views

Last post by ramcdougal
Sun Jun 07, 2020 5:41 pm
Open MPI error with h.nrnmpi_init(): mca_base_component_repository_open: unable to open mca_patcher_overwrite

Last post by hines « Wed Jun 03, 2020 9:08 am
Replies: 7
by tony-azevedo » Sat May 30, 2020 10:04 am

7 Replies

43134 Views

Last post by hines
Wed Jun 03, 2020 9:08 am
Syntax Warning

Last post by ramcdougal « Mon Jun 01, 2020 1:44 pm
Replies: 1
by ryang » Fri May 29, 2020 2:18 pm

1 Replies

35088 Views

Last post by ramcdougal
Mon Jun 01, 2020 1:44 pm
Running hoc files from sublime text 3

Last post by ryang « Fri May 29, 2020 1:50 pm
Replies: 1
by ryang » Thu May 28, 2020 5:05 pm

1 Replies

33450 Views

Last post by ryang
Fri May 29, 2020 1:50 pm
NRNGUI not working from command line after switch to zsh

Last post by ryang « Wed May 27, 2020 5:22 pm
Replies: 10
by sbrich » Fri Mar 13, 2020 3:24 pm

10 Replies

48227 Views

Last post by ryang
Wed May 27, 2020 5:22 pm

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