Adding new mechanisms and functions to NEURON

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"My mechanisms don't load!"

Last post by mildan « Wed Jun 20, 2018 4:38 am
Replies: 21
by ted » Wed Aug 11, 2010 10:30 am
1

2
21 Replies

159697 Views

Last post by mildan
Wed Jun 20, 2018 4:38 am
How to implement temperature dependent rates

Last post by bosleyjr « Tue Jun 18, 2013 4:59 pm
Replies: 3
by ted » Wed Mar 15, 2006 12:15 pm

3 Replies

71184 Views

Last post by bosleyjr
Tue Jun 18, 2013 4:59 pm
Block sequence in NMODL

Last post by ted « Thu Aug 31, 2006 11:05 am

by ted » Thu Aug 31, 2006 11:05 am

0 Replies

64501 Views

Last post by ted
Thu Aug 31, 2006 11:05 am
Adding new mechanisms to NEURON

Last post by ted « Thu Aug 03, 2006 5:11 pm
Replies: 1
by ted » Thu Dec 15, 2005 4:35 pm

1 Replies

70730 Views

Last post by ted
Thu Aug 03, 2006 5:11 pm
Where to learn about mod files and NMODL

Last post by ted « Thu May 19, 2005 10:11 pm

by ted » Thu May 19, 2005 10:11 pm

0 Replies

86583 Views

Last post by ted
Thu May 19, 2005 10:11 pm
Boltzmann and elementary charge values

Last post by ted « Wed Feb 05, 2025 5:35 pm
Replies: 6
by bremen » Fri Jan 31, 2025 3:32 am

6 Replies

67150 Views

Last post by ted
Wed Feb 05, 2025 5:35 pm
How to call my ionic current variable implemented in NMODL in HOC

Last post by ted « Thu Nov 14, 2024 11:19 am
Replies: 12
by MarvinM » Thu Oct 17, 2024 8:41 am

12 Replies

53045 Views

Last post by ted
Thu Nov 14, 2024 11:19 am
Updating the derivative in a NET_RECEIVE block

Last post by ted « Sun Sep 29, 2024 12:30 pm
Replies: 1
by urid » Thu Sep 26, 2024 10:31 pm

1 Replies

33106 Views

Last post by ted
Sun Sep 29, 2024 12:30 pm
Conditionally Using Ions for Ion Pool Regulation

Last post by ted « Mon Sep 16, 2024 4:35 pm
Replies: 3
by urid » Fri Sep 13, 2024 2:01 pm

3 Replies

42093 Views

Last post by ted
Mon Sep 16, 2024 4:35 pm
Problem with expsyn

Last post by ipv1313 « Fri Jun 07, 2024 11:27 am
Replies: 1
by ipv1313 » Fri Jun 07, 2024 6:22 am

1 Replies

34523 Views

Last post by ipv1313
Fri Jun 07, 2024 11:27 am
Recording variables from ARTIFICIAL_CELL

Last post by pascal « Fri May 24, 2024 3:23 pm
Replies: 14
by rth » Tue Apr 23, 2024 1:43 pm

14 Replies

64605 Views

Last post by pascal
Fri May 24, 2024 3:23 pm
"xtra is not a mechanism"

Last post by ted « Thu Apr 04, 2024 8:15 pm
Replies: 7
by firoozeh » Tue Apr 02, 2024 12:18 pm

7 Replies

38584 Views

Last post by ted
Thu Apr 04, 2024 8:15 pm
Units in NMODL

Last post by Robert Claar « Thu Jan 18, 2024 11:23 am
Replies: 6
by Robert Claar » Sat Jan 13, 2024 2:42 pm

6 Replies

43899 Views

Last post by Robert Claar
Thu Jan 18, 2024 11:23 am
Performing calculations involving values from multiple Sections and mod files

Last post by Robert Claar « Fri Aug 18, 2023 1:01 pm

by Robert Claar » Fri Aug 18, 2023 1:01 pm

0 Replies

96990 Views

Last post by Robert Claar
Fri Aug 18, 2023 1:01 pm
Stimulus Activation/Deactivation in NMODL

Last post by ted « Fri Aug 11, 2023 12:47 pm
Replies: 3
by ajpc6d » Sat Aug 05, 2023 5:04 pm

3 Replies

38978 Views

Last post by ted
Fri Aug 11, 2023 12:47 pm
NMODL code no longer works in version 8.2

Last post by pascal « Wed Aug 09, 2023 11:00 pm
Replies: 7
by pascal » Mon Aug 07, 2023 12:41 pm

7 Replies

48166 Views

Last post by pascal
Wed Aug 09, 2023 11:00 pm
Extracellular Mechanism and Hodgkin-Huxley

Last post by ajpc6d « Fri Jul 21, 2023 10:20 am
Replies: 10
by ajpc6d » Fri Jul 07, 2023 10:23 am

10 Replies

54009 Views

Last post by ajpc6d
Fri Jul 21, 2023 10:20 am
modelling homeosatic neuron using mod files

Last post by ted « Thu Jul 06, 2023 11:07 am
Replies: 1
by bjuon » Thu Jul 06, 2023 7:00 am

1 Replies

30918 Views

Last post by ted
Thu Jul 06, 2023 11:07 am
Running Model on HPC

Last post by AMaxion « Wed Jul 05, 2023 5:53 am
Replies: 2
by AMaxion » Fri Jun 16, 2023 3:26 am

2 Replies

32782 Views

Last post by AMaxion
Wed Jul 05, 2023 5:53 am
NameError: Name Not Defined for Distributed Mechanism

Last post by ramcdougal « Thu Jun 29, 2023 11:05 am
Replies: 3
by TrZ » Sun Jun 18, 2023 11:05 pm

3 Replies

35854 Views

Last post by ramcdougal
Thu Jun 29, 2023 11:05 am
Getting an error while setting the initial calcium concentration

Last post by ipv1313 « Wed Jun 14, 2023 9:35 am

by ipv1313 » Wed Jun 14, 2023 9:35 am

0 Replies

79911 Views

Last post by ipv1313
Wed Jun 14, 2023 9:35 am
Using NMODL integration of ODEs: sparse

Last post by gaoyy18 « Mon Apr 03, 2023 2:03 am
Replies: 6
by gaoyy18 » Mon Mar 27, 2023 8:56 am

6 Replies

34268 Views

Last post by gaoyy18
Mon Apr 03, 2023 2:03 am
What is the numeric integration method of cnexp?

Last post by ted « Wed Mar 29, 2023 11:41 am
Replies: 2
by gaoyy18 » Sun Mar 26, 2023 12:42 pm

2 Replies

29632 Views

Last post by ted
Wed Mar 29, 2023 11:41 am
Current NMODL Best Practices

Last post by ted « Mon Mar 20, 2023 8:43 pm
Replies: 3
by ajpc6d » Mon Mar 20, 2023 11:19 am

3 Replies

33335 Views

Last post by ted
Mon Mar 20, 2023 8:43 pm
Add a VClamp of a specific form.

Last post by cassiehu « Fri Mar 03, 2023 8:30 am
Replies: 3
by cassiehu » Thu Mar 02, 2023 4:21 am

3 Replies

29410 Views

Last post by cassiehu
Fri Mar 03, 2023 8:30 am
alternating the expression of GABA current in mod file

Last post by ted « Mon Jan 02, 2023 11:52 pm
Replies: 5
by alexandrapierri » Wed Dec 07, 2022 9:06 pm

5 Replies

33988 Views

Last post by ted
Mon Jan 02, 2023 11:52 pm
Is inserting the hh mechanism compulsory?

Last post by ted « Mon Dec 26, 2022 11:25 am
Replies: 1
by ipv1313 » Mon Dec 26, 2022 4:09 am

1 Replies

25654 Views

Last post by ted
Mon Dec 26, 2022 11:25 am
How to get total receptor current

Last post by ted « Wed Dec 07, 2022 12:02 pm
Replies: 1
by ipv1313 » Tue Dec 06, 2022 4:58 am

1 Replies

25163 Views

Last post by ted
Wed Dec 07, 2022 12:02 pm
modlunit Conversion Factor

Last post by ted « Thu Nov 10, 2022 1:51 pm
Replies: 2
by AliAli » Thu Nov 03, 2022 10:47 am

2 Replies

25987 Views

Last post by ted
Thu Nov 10, 2022 1:51 pm
Insert an ion channel written in a .mod file

Last post by ted « Fri Sep 30, 2022 4:13 am
Replies: 8
by cassiehu » Sun Sep 11, 2022 10:33 pm

8 Replies

54827 Views

Last post by ted
Fri Sep 30, 2022 4:13 am
mechanisms written in python?

Last post by ted « Wed Aug 03, 2022 2:34 pm
Replies: 5
by alexandrapierri » Mon Aug 01, 2022 9:24 pm

5 Replies

34624 Views

Last post by ted
Wed Aug 03, 2022 2:34 pm
'y' is a reserved word?

Last post by fietkiewicz « Thu Jun 23, 2022 1:02 pm
Replies: 2
by fietkiewicz » Mon Jun 13, 2022 5:54 pm

2 Replies

28443 Views

Last post by fietkiewicz
Thu Jun 23, 2022 1:02 pm
Does POINTER make NET_RECEIVE slower?

Last post by fietkiewicz « Thu Jun 09, 2022 10:52 am
Replies: 9
by fietkiewicz » Tue May 24, 2022 9:48 pm

9 Replies

53314 Views

Last post by fietkiewicz
Thu Jun 09, 2022 10:52 am
Help with adding equation to mechanism

Last post by ted « Thu Apr 21, 2022 2:48 pm
Replies: 7
by rquadir » Wed Apr 06, 2022 1:06 am

7 Replies

33074 Views

Last post by ted
Thu Apr 21, 2022 2:48 pm
Adding delay to a graded synapse model

Last post by ted « Thu Jan 20, 2022 11:44 am
Replies: 6
by subhacom » Mon Oct 07, 2019 11:04 am

6 Replies

42126 Views

Last post by ted
Thu Jan 20, 2022 11:44 am
How to update the weight vector of a NetCon per time step

Last post by klein « Thu Jan 06, 2022 3:09 pm
Replies: 4
by klein » Mon Jan 03, 2022 11:15 pm

4 Replies

29550 Views

Last post by klein
Thu Jan 06, 2022 3:09 pm
Modifying cell capacitance (cm) via a mod file (also cai)

Last post by roybens « Tue Oct 26, 2021 12:56 pm
Replies: 2
by roybens » Mon Oct 25, 2021 3:34 pm

2 Replies

28535 Views

Last post by roybens
Tue Oct 26, 2021 12:56 pm
undersampling curves

Last post by ted « Tue Oct 19, 2021 12:43 pm
Replies: 9
by thitsa » Thu Oct 07, 2021 7:39 am

9 Replies

67216 Views

Last post by ted
Tue Oct 19, 2021 12:43 pm
Strangeness when recording state variable

Last post by NickHananeia « Mon Jul 12, 2021 11:36 am
Replies: 6
by NickHananeia » Thu Jul 08, 2021 8:07 am

6 Replies

34331 Views

Last post by NickHananeia
Mon Jul 12, 2021 11:36 am
Changing range parameters

Last post by renewilbers « Sun Jun 20, 2021 4:59 pm
Replies: 1
by renewilbers » Sat Jun 19, 2021 10:16 am

1 Replies

27422 Views

Last post by renewilbers
Sun Jun 20, 2021 4:59 pm
Questions about the extracellular mechanism and the syntax of NMODL

Last post by ted « Mon May 10, 2021 3:03 pm
Replies: 4
by Christine Chung » Mon May 03, 2021 5:43 am

4 Replies

30817 Views

Last post by ted
Mon May 10, 2021 3:03 pm
mod file CVODE compatibility

Last post by Darshan « Fri May 07, 2021 4:17 pm
Replies: 12
by Brad » Wed Jun 15, 2005 12:13 pm

12 Replies

58207 Views

Last post by Darshan
Fri May 07, 2021 4:17 pm
calling a function from NMODL

Last post by hines « Tue Mar 23, 2021 7:47 pm
Replies: 10
by Nooshin » Sat Mar 13, 2021 7:32 pm

10 Replies

42593 Views

Last post by hines
Tue Mar 23, 2021 7:47 pm
netstim and randomness

Last post by ted « Tue Mar 09, 2021 4:14 pm
Replies: 1
by fabien tell » Sun Mar 07, 2021 12:49 pm

1 Replies

27228 Views

Last post by ted
Tue Mar 09, 2021 4:14 pm
How to find EXp2Syn

Last post by fabien tell « Mon Feb 22, 2021 1:04 pm
Replies: 2
by fabien tell » Sun Feb 21, 2021 7:58 am

2 Replies

26999 Views

Last post by fabien tell
Mon Feb 22, 2021 1:04 pm
Mechanisms in nrnmech.dll do not seem to be loading in python script

Last post by ted « Wed Feb 10, 2021 9:59 am
Replies: 5
by Liz_Stan_88 » Tue Feb 09, 2021 11:22 am

5 Replies

36687 Views

Last post by ted
Wed Feb 10, 2021 9:59 am
A pump MOD file and no concentration inside

Last post by ted « Mon Feb 01, 2021 1:53 pm
Replies: 3
by bremen » Sat Jan 30, 2021 3:00 am

3 Replies

28639 Views

Last post by ted
Mon Feb 01, 2021 1:53 pm
Modelling of subcellular signalling

Last post by ted « Wed Nov 18, 2020 10:42 pm
Replies: 1
by jofrony » Wed Nov 18, 2020 1:25 pm

1 Replies

27931 Views

Last post by ted
Wed Nov 18, 2020 10:42 pm
Frequency dependent activation of g protein models

Last post by ted « Mon Sep 14, 2020 3:17 pm
Replies: 2
by jofrony » Tue Nov 12, 2019 6:20 am

2 Replies

33731 Views

Last post by ted
Mon Sep 14, 2020 3:17 pm
injecting continuous normally distributed noise in python

Last post by ted « Mon Sep 14, 2020 3:10 pm
Replies: 2
by thiank » Sun Aug 25, 2019 10:57 pm

2 Replies

31367 Views

Last post by ted
Mon Sep 14, 2020 3:10 pm

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