Search found 71 matches
- Fri Apr 08, 2016 9:24 am
- Forum: Adding new mechanisms and functions to NEURON
- Topic: different mechanisms and temperature
- Replies: 6
- Views: 12898
different mechanisms and temperature
Dear Ted, I have a two compartments model. In one of this compartments I inserted two temperature-dependent mechanisms: hh.mod and Na/K pump. The hh is the classical built in NEURON model. In this model the parameters are setted at 6.3 degC. The parameters of the Na/K pump model are setted at the ex...
- Fri Mar 11, 2016 5:13 am
- Forum: Getting started
- Topic: insert a membrane mechanism at a specific simulation time
- Replies: 5
- Views: 8155
Re: insert a membrane mechanism at a specific simulation tim
Dear Ted,
yes I agree. I know that it is not physiological.
What do you mean with:
[/quote]use events to change the pump's rate of action?
Thanks
Best
Menica
yes I agree. I know that it is not physiological.
What do you mean with:
[/quote]use events to change the pump's rate of action?
Thanks
Best
Menica
- Thu Mar 10, 2016 6:39 am
- Forum: Getting started
- Topic: insert a membrane mechanism at a specific simulation time
- Replies: 5
- Views: 8155
Re: insert a membrane mechanism at a specific simulation tim
Dear Ted, thanks for the suggestion. It works but I am afraid, as you wrote, that it could easly cause problems when insterted in a more complex model (as I am planning). I could change the pump's rate before the spike arrives, make it smaller before the spike, but also this sounds to me a trick tha...
- Thu Feb 18, 2016 7:30 am
- Forum: Getting started
- Topic: insert a membrane mechanism at a specific simulation time
- Replies: 5
- Views: 8155
insert a membrane mechanism at a specific simulation time
Hi!
I would like insert the N/K pump mechanism at a fixed time. This time should be equal to the delay at which I set the IClamp.
How I could do this?
Best,
Menica
I would like insert the N/K pump mechanism at a fixed time. This time should be equal to the delay at which I set the IClamp.
How I could do this?
Best,
Menica
- Mon Jan 11, 2016 9:14 am
- Forum: Getting started
- Topic: time constant
- Replies: 4
- Views: 7445
Re: time constant
Dear Ted,
thanks for your explanation
thanks for your explanation
- Fri Jan 08, 2016 6:27 am
- Forum: Getting started
- Topic: time constant
- Replies: 4
- Views: 7445
Re: time constant
I need to plot the time constants for the three gates.
For rate process time constant I mean
mtau, htau, ntau
They are GLOBAL variables in the hh.mod, so are not accessible to hoc.
How can I modify the hh.mod?
For rate process time constant I mean
mtau, htau, ntau
They are GLOBAL variables in the hh.mod, so are not accessible to hoc.
How can I modify the hh.mod?
- Thu Jan 07, 2016 9:31 am
- Forum: Getting started
- Topic: time constant
- Replies: 4
- Views: 7445
time constant
Hi, I would like plot the rate process time constants for the K+ activation gate and the Na+ activation and inactivation gates.
There is a easy way to do it with neuron?
thanks
Menica
There is a easy way to do it with neuron?
thanks
Menica
- Thu Dec 17, 2015 8:32 am
- Forum: Adding new mechanisms and functions to NEURON
- Topic: chloride channel
- Replies: 2
- Views: 7212
Re: chloride channel
Thanks!
- Thu Dec 10, 2015 6:11 am
- Forum: Adding new mechanisms and functions to NEURON
- Topic: chloride channel
- Replies: 2
- Views: 7212
chloride channel
Hi, I need to insert a chloride leak channel (CIC-2). Where I could find this .mod mechanism implemented? I try to search on modelDB, but I found only the GABA receptors model. I would like to insert also a potassium-chloride co-transporter (KCC2) and a sodium-potassium-chloride co-transporter (NKCC...
- Mon Oct 26, 2015 10:04 am
- Forum: Adding new mechanisms and functions to NEURON
- Topic: Understanding Na Dynamics
- Replies: 7
- Views: 10500
Re: Understanding Na Dynamics
Hi namisha, I have your similar problems.
How did you resolve the problem to connect the na-k pump to internal sodium concentration change?
thanks
How did you resolve the problem to connect the na-k pump to internal sodium concentration change?
thanks
- Tue Oct 06, 2015 11:35 am
- Forum: Getting started
- Topic: look at the currents in the neuron connected with a ExpSyn
- Replies: 1
- Views: 5904
look at the currents in the neuron connected with a ExpSyn
I am starting with neuron. I am trying to make a code to connect two neurons trough an exitatory synapse and look at the Na, k and pump currents. I can visualize the na and k currents in the presynaptic neuron, but seems that the signal does not arrive to the post synaptic dendtrite. This is what i ...