Search found 69 matches
- Fri Jan 04, 2019 3:02 pm
- Forum: NEURON + Python
- Topic: How can python read from a hoc file templates and procs?
- Replies: 7
- Views: 7060
Re: How can python read from a hoc file templates and procs?
Thank you Ted. As a matter of fact, the code I posted is a toy code I use to experiment/understand how Python reads variables, parameters and their values from NEURON. From your response I realize that the idea is that Python reads the type of variables and parameters defined in hoc but expects that...
- Fri Dec 21, 2018 6:01 pm
- Forum: NEURON + Python
- Topic: How can python read from a hoc file templates and procs?
- Replies: 7
- Views: 7060
How can python read from a hoc file templates and procs?
Hello developers I want my python script to read from a NEURON hoc script and and I am facing difficulties having python read variables if they are defined within a template or a proc and not on top level. How can python read parameters right (and in general any variable in hoc) if defined within a ...
- Wed Dec 19, 2018 8:34 pm
- Forum: SimTracker
- Topic: fscan confused with comment lines
- Replies: 1
- Views: 54898
fscan confused with comment lines
Hello
Is it true that fscan is confused with comment lines and is there a way to add comments in a text file that needs to be read by fscan?
Is it true that fscan is confused with comment lines and is there a way to add comments in a text file that needs to be read by fscan?
- Sat Jun 23, 2018 8:54 pm
- Forum: UNIX/Linux
- Topic: libreadline.so.0: cannot open shared object file: No such file or directory
- Replies: 1
- Views: 10952
libreadline.so.0: cannot open shared object file: No such file or directory
hello after installation of NEURON 7.5 in linux, trying to execute a previous hoc script by running nrniv produces the following errors: NEURON: Couldn't find: stdlib.hoc NEURON: Couldn't find: import3d.hoc libreadline.so.0: cannot open shared object file: No such file or directory I searched for th...
- Mon Jan 01, 2018 11:41 pm
- Forum: MSWin
- Topic: neuron 7.5 crashes on cygwin 2.9.0
- Replies: 6
- Views: 16482
Re: neuron 7.5 crashes on cygwin 2.9.0
I will keep that in mind about finding a workaround with Python ( I do have Python installed) but will switch to linux for now.
thanks a lot for all help Ted!
thanks a lot for all help Ted!
- Sat Dec 30, 2017 11:35 am
- Forum: MSWin
- Topic: neuron 7.5 crashes on cygwin 2.9.0
- Replies: 6
- Views: 16482
Re: neuron 7.5 crashes on cygwin 2.9.0
Thanks again Ted Based on SimTracker instructions Cygwin is required on Windows operating systems to enable certain Linux commands used by the SimTracker. http://mariannebezaire.com/simtracker/ For instance based on the instructions the packages below are required: • openssh • procps • rsync Unfortu...
- Thu Dec 21, 2017 1:26 pm
- Forum: MSWin
- Topic: neuron 7.5 crashes on cygwin 2.9.0
- Replies: 6
- Views: 16482
Re: neuron 7.5 crashes on cygwin 2.9.0
Hi Ted thanks so much for your prompt response. I need cygwin for SimTracker (by Marianne Bezaire) and I assumed that the latest version of NEURON is what I should install. Would you suggest that I install a previous version of NEURON to use with cygwin on Sim Tracker? thank you again, Alexandra
- Wed Dec 20, 2017 10:15 pm
- Forum: MSWin
- Topic: neuron 7.5 crashes on cygwin 2.9.0
- Replies: 6
- Views: 16482
neuron 7.5 crashes on cygwin 2.9.0
Hello NEURON team, 1. On my Windows 10 machine NEURON 7.5 crashes on cygwin 2.9.0 after successful installation of cygwin. I have tried to install first NEURON and then cygwin or reverse the order of installation and the problem persists. The extra packages I have installed with cygwin are: 1. procp...
- Tue Nov 21, 2017 10:22 pm
- Forum: SimTracker
- Topic: Welcome to the SimTracker Forum!
- Replies: 1
- Views: 41894
Re: Welcome to the SimTracker Forum!
Hello! After installing Sim Tracker I encounter the following issue when trying to run NetClamp. As per the installation instructions I run Netclamp from the CA1 repository while importing the ca1_centerlfp_long_exc_065_01 from Open Science Framework. Any help with this matlab error would be greatly...