Dear Ted,
Thank you!
When I set the NEURON block to GLOBAL isampa, the code didn't work. The error said that it couldn't find the isampa variable. When I changed GLOBAL to RANGE, it worked.
Thanks,
Maria
Search found 36 matches
- Tue Jan 19, 2016 11:15 am
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
- Sat Jan 16, 2016 3:29 pm
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
Re: recording currents
When I try to record from the external stimulation, I use the following code objref tone2LAPrecord tone2LAPrecord = new List() for i=0, 799 { objref tonevec tonevec=new Vector() tonevec.record(&tone2LAPsyn[i].inmda) tone2LAPrecord.append(tonevec) } I get the error /usr/local/nrn/x86_64/bin/nrniv: sy...
- Sat Jan 16, 2016 2:38 pm
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
Re: recording currents
How do you check the type of an object?
Thanks,
Maria
Thanks,
Maria
- Sat Jan 16, 2016 12:58 pm
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
Re: recording currents
I tried to search all sorts of resources for how to place a conditional for checking whether a variable is a public member of the point process and I can't find anything. Would really appreciate your help.
Maria
Maria
- Sat Jan 16, 2016 10:42 am
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
Re: recording currents
I made the following code objref synivecs // will be a List that contains the Vectors to which the synaptic currents are recorded synivecs = new List() // $o1 is a list that contains the synaptic mechanisms whose currents are to be recorded obfunc makesyniveclist() { local i localobj tmplist, tmpvec...
- Fri Jan 15, 2016 9:31 am
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
Re: recording currents
Thank you, Ted!
Yes, we will need to fractionate the currents and you're right the external spike trains, coming from the cortex and thalamus, must also be recorded for the LFP.
I would appreciate any further help.
Maria
Yes, we will need to fractionate the currents and you're right the external spike trains, coming from the cortex and thalamus, must also be recorded for the LFP.
I would appreciate any further help.
Maria
- Tue Jan 12, 2016 1:21 pm
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
Re: recording currents
Dear Ted, Thank you for your reply! I'm working on a model of lateral amygdala https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=150288 The cells are defined in this file https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=150288&file=/KimEtAl2013/LA_model_main_file.hoc The synap...
- Mon Jan 11, 2016 1:07 pm
- Forum: Other questions
- Topic: recording currents
- Replies: 23
- Views: 4918
recording currents
Hello,
How would you record GABA, AMPA and NMDA currents going through a cell population? I need it as an approximation to the LFP. Really don't know where to start.
Thank you,
Maria
How would you record GABA, AMPA and NMDA currents going through a cell population? I need it as an approximation to the LFP. Really don't know where to start.
Thank you,
Maria
- Wed Dec 30, 2015 1:20 pm
- Forum: Adding new mechanisms and functions to NEURON
- Topic: colon : in a mod file
- Replies: 2
- Views: 6696
Re: colon : in a mod file
Thank you so much, Ted. I'm reading the book, but it's taking some time.
- Wed Dec 30, 2015 12:15 pm
- Forum: Modeling networks
- Topic: Segmentation Error
- Replies: 1
- Views: 5600
Re: Segmentation Error
Oops, sorry I got rid of the error by importing some more files at the beginning of the file! Just formulating the question helped me to see the answer.
- Wed Dec 30, 2015 12:12 pm
- Forum: Modeling networks
- Topic: Segmentation Error
- Replies: 1
- Views: 5600
Segmentation Error
Hello, My name is Maria. I'm working with a model of the amygdala from ModelDB https://senselab.med.yale.edu/modeldb/ShowModel.cshtml?model=150288&file=/KimEtAl2013/ I'm trying to slowly dissect the model by running separate parts. The model itself runs without problems. However when I do the follow...
- Tue Dec 29, 2015 4:48 am
- Forum: Other questions
- Topic: Notation
- Replies: 2
- Views: 1316
Re: Notation
Thank you, Ted!:-)
- Tue Dec 29, 2015 4:47 am
- Forum: Adding new mechanisms and functions to NEURON
- Topic: colon : in a mod file
- Replies: 2
- Views: 6696
colon : in a mod file
What does the following notation mean in NEURON?
Thanks,
Maria
Code: Select all
lambda1 = 80 : 60 : 12 :80: 20 : 15 :8 :5: 2.5
Maria
- Mon Dec 28, 2015 1:16 pm
- Forum: Getting started
- Topic: amp
- Replies: 2
- Views: 5590
Re: amp
Thank you, Ted!
- Mon Dec 28, 2015 11:38 am
- Forum: Anatomically detailed models
- Topic: Adding a synapse
- Replies: 2
- Views: 5762
Re: Adding a synapse
Oops, got it you have to do
I found it in the NEURON book.
My question is, how come in this file https://senselab.med.yale.edu/ModelDB/S ... oCells.hoc
there is no objref? Is it because it's a function?
Thanks,
Maria
Code: Select all
objref syn
My question is, how come in this file https://senselab.med.yale.edu/ModelDB/S ... oCells.hoc
there is no objref? Is it because it's a function?
Thanks,
Maria