Search found 3 matches

by tuh36651
Tue Sep 29, 2020 10:11 am
Forum: Other questions
Topic: spatial discretization, and saving results
Replies: 1
Views: 375

spatial discretization, and saving results

1) I noticed in the gui a user can specify d_X in the geometry --> is there an equivalent way to do this when working in python? In python I am able to access sec.L and sec.nseg (as a work around I tried computing L/d_X and take the floor (or ceiling?) of the value and this would be nseg) 2) In yale...
by tuh36651
Sat Sep 05, 2020 7:31 pm
Forum: Other questions
Topic: Regarding diameter of geometry
Replies: 1
Views: 491

Regarding diameter of geometry

Hello, I am have imported a cell (in the gui, I am a little new to using) and I am running Hodgkin Huxley Channel simulation on the cell. I am modifying the geometric parameter: diameter and biophysical parameter Ra and Cm. I have set the diameter to 1.4e-6, kept Ra and Cm to default, and I am notic...
by tuh36651
Tue Jul 28, 2020 1:15 pm
Forum: Other questions
Topic: SWC file refinements
Replies: 1
Views: 436

SWC file refinements

I have two swc files i.e. 0ref.swc and 1ref.swc, where 'ref' means refinement. The file 0ref.swc is the original neuron geometry containing 1389 vertices and 1388 edges. The file 1ref.swc is a refined version of 0ref.swc, meaning that if A,B are two points in 0ref.swc, then A,M,B are the points in 1...