Search found 10 matches

by Liz_Stan_88
Wed Jul 20, 2022 4:42 pm
Forum: OS X
Topic: Can't Load .mod files in Python Script
Replies: 4
Views: 12481

Re: Can't Load .mod files in Python Script

I just wanted to post the solution to the problem, I was correct I was not referring to the file special directly. Thus my solution was simple and seen below: h.nrn_load_dll("directory_path/arm64/special") Where directory_path refers explicitly to the directory path in which the folder cre...
by Liz_Stan_88
Wed Jul 20, 2022 2:36 pm
Forum: OS X
Topic: Can't Load .mod files in Python Script
Replies: 4
Views: 12481

Re: Can't Load .mod files in Python Script

Oh goodness, thank you Ted for pointing out my typo. I will edit the post and fix it. Working off your suggestions I will post the code of the klt.mod below, just to ensure that I am not being silly in my understanding, but also to give you insight into the .mod file to help in solving this issue. 1...
by Liz_Stan_88
Wed Jul 20, 2022 9:27 am
Forum: OS X
Topic: Can't Load .mod files in Python Script
Replies: 4
Views: 12481

Can't Load .mod files in Python Script

Good Day Neuron Community, I am having a slight issue with accessing my mod files in my python script. I am new to using Neuron and Python on a Mac (M1), and I am struggling in setting up the new method of h.nrn_load_dll for mac. I assume I have done everything correctly namely these steps below: 1....
by Liz_Stan_88
Thu Apr 15, 2021 8:32 am
Forum: NEURON + Python
Topic: Simulation Setup when using a List of NetCons, VecStims and Exp2Syn for multiple spike train stimulation
Replies: 3
Views: 4824

Re: Simulation Setup when using a List of NetCons, VecStims and Exp2Syn for multiple spike train stimulation

Thank you so much ramcdougal for your quick response. I do understand I put alot of information in my query and it definitely is a lot to get one's head wrapped around. I'm not sure I understand your placement array, but there's a comment "L = Length of each segment = 1/nseg"... the length...
by Liz_Stan_88
Wed Apr 14, 2021 4:03 pm
Forum: NEURON + Python
Topic: Simulation Setup when using a List of NetCons, VecStims and Exp2Syn for multiple spike train stimulation
Replies: 3
Views: 4824

Simulation Setup when using a List of NetCons, VecStims and Exp2Syn for multiple spike train stimulation

Good Day Mr Carnevale and Mr Hines, I was wondering if you could assist my understanding when simulating a neuron with multiple synaptic inputs along its dendrite. Let me describe my setup and my code to give the bigger picture, followed by the questions I have. I am using Zilany's Model 2014 to gen...
by Liz_Stan_88
Wed Feb 10, 2021 3:32 am
Forum: Adding new mechanisms and functions to NEURON
Topic: Mechanisms in nrnmech.dll do not seem to be loading in python script
Replies: 5
Views: 10104

Re: Mechanisms in nrnmech.dll do not seem to be loading in python script

Thank you once again Ted. And I love NEURON, its been fun working with it and using it in my research. All very good. So where's the problem? Probably in the h.nrn_load_dll() statement. According to the Programmer's Reference https://neuronsimulator.github.io/nrn/h ... n_load_dll, where dll_file_nam...
by Liz_Stan_88
Tue Feb 09, 2021 4:55 pm
Forum: Adding new mechanisms and functions to NEURON
Topic: Mechanisms in nrnmech.dll do not seem to be loading in python script
Replies: 5
Views: 10104

Re: Mechanisms in nrnmech.dll do not seem to be loading in python script

Thank you for getting back to me so promptly Ted. I really appreciate it. I have done what you have suggested and this is what I have received: Putting the NMODL file in its own directory and compiling it with mknrndll, the terminal outputs as follows: NEURON -- VERSION 7.8.2 release/7.8 (09b151ec) ...
by Liz_Stan_88
Tue Feb 09, 2021 11:22 am
Forum: Adding new mechanisms and functions to NEURON
Topic: Mechanisms in nrnmech.dll do not seem to be loading in python script
Replies: 5
Views: 10104

Mechanisms in nrnmech.dll do not seem to be loading in python script

Good Day Mr. Carnevale and/ Mr. Hines, I have recently for some unknown reason run into an error when trying to run my python script with NEURON. It seems as though python is not loading my nrnmech.dll file all of a sudden as I am receiving the below error: soma.insert('klt') ValueError: argument no...
by Liz_Stan_88
Mon Aug 26, 2019 6:06 am
Forum: NEURON + Python
Topic: Issue with Exp2Syn and stimulation of multiple dendrites
Replies: 3
Views: 3228

Re: Issue with Exp2Syn and stimulation of multiple dendrites

Firstly, thank you very much for the swift response Ted. You're off to a good start. Signs of expertise in programming and probably also model development (commented, well-organized code; a methodical attack that included using an alternative means of implementing the model, AND resorting to a simpl...
by Liz_Stan_88
Thu Aug 22, 2019 4:20 am
Forum: NEURON + Python
Topic: Issue with Exp2Syn and stimulation of multiple dendrites
Replies: 3
Views: 3228

Issue with Exp2Syn and stimulation of multiple dendrites

Good Day, I was wondering if someone could either help enlighten me or provide me an answer for a particular issue/phenomenon I am having. Background: I am attempting to recreate the Octopus Cell neuron (i.e. found in the cochlear nucleus) in NEURON based on the data and publications of D. Oertel an...