Search found 18 matches

by JBall
Thu Jun 17, 2010 12:32 pm
Forum: Parallel NEURON
Topic: Regarding saving data from parallel simulations
Replies: 5
Views: 3976

Re: Regarding saving data from parallel simulations

I love being accidentally correct! In seriousness, though, if in this case I want to ensure that a processor is performing an operation only if the cell exists on the node, assuming I don't have one cell per node, would a better option be: for(i=0;i<NCELL; i += 1){ if(pc.gid_exists(i)) { do these th...
by JBall
Wed Jun 16, 2010 5:06 pm
Forum: Parallel NEURON
Topic: Regarding saving data from parallel simulations
Replies: 5
Views: 3976

Re: Regarding saving data from parallel simulations

I agree that having the voltage output at every time step of each cell during a large network simulation is not necessarily useful; I'm doing this mostly as a test to teach myself how to implement parallel neuron code. My hope is that what I learn by doing this will carry over into my actual work wi...
by JBall
Tue Jun 15, 2010 9:15 pm
Forum: Parallel NEURON
Topic: Regarding saving data from parallel simulations
Replies: 5
Views: 3976

Regarding saving data from parallel simulations

I have what is probably a relatively simple problem, but I haven't been able to solve it on my own. I finally have a parallel simulation running on our university's supercluster that is based on the example "ring network" code in Hines & Carnevale 2008 in J. Neurosci Methods. I've inse...