www.neuron.yale.edu

Suggestions and Feedback
Suggestions for improvements to the NEURON Forum.

NEURON Announcements
News about new releases of NEURON, bug fixes, development threads, courses/conferences/workshops, meetings of the NEURON Users' Group etc.

OS X

MSWin

UNIX/Linux

NEURON + Python
When Python is the interpreter, what is a good
design for the interface to the basic NEURON
concepts.
Moderator: hines

Reaction-diffusion in NEURON
Extending NEURON to handle reaction-diffusion problems.
Moderators: hines, wwlytton, ramcdougal

NEURON hacks
Particularly useful chunks of hoc and/or NMODL code. May be pedestrian or stunningly brilliant, may make you gasp or bring tears to your eyes, but always makes you think "I wish I had written that; I'm sure going to steal it."

Hot tips
A collection of noteworthy items selected by our moderators from discussions about making and using models with NEURON.
Moderators: ted, wwlytton, tom_morse

Getting started
The basics of how to develop, test, and use models.

The GUI
Using the graphical user interface to build and exercise models. Includes customizing the GUI by writing a little bit of hoc.

Anatomically detailed models
Managing anatomically complex model cells with the CellBuilder. Importing morphometric data with NEURON's Import3D tool or Robert Cannon's CVAPP. Where to find detailed morphometric data.

Adding new mechanisms and functions to NEURON
NMODL and the Channel Builder.

Modeling networks
Moderator: wwlytton

Optimization
Using the Multiple Run Fitter, praxis, etc..

Parallel NEURON
General issues of interest both for network and
individual cell parallelization.
Moderator: hines

Other questions
Anything that doesn't fit elsewhere.

HNN: Human Neocortical Neurosolver
A tool for testing hypotheses about circuit mechanisms underlying EEG/MEG data
Moderator: samnemo

LFPsim
Discussions about LFPsim, a tool for simulating local field potentials
Moderator: tom_morse

NetPyNE
A Python package that facilitates development and use of models of biological neural networks
Moderator: tom_morse

SimAgent
Discussions about SimAgent, a tool for submitting jobs directly to NSG from your local computer
Moderator: tyler

SimTracker
Discussions about SimTracker, a tool for managing model development and execution
Moderator: neuromau

Other tools

From Computer to Brain
Discussions about Bill Lytton's book "From Computer to Brain."
Moderator: wwlytton

Neurons in Action
Discussions about "Neurons in Action," the book and software created by John Moore and Ann Stuart.
Moderator: stuart

SWIMMY
Discussions about SWIMMY, a "virtual fish" developed by Frank Krasne for teaching basic neurophysiology and introducing the experimental analysis of neural circuits.
Moderator: Natalie

Other ways of using NEURON in neuroscience education
Other approaches to using NEURON in neuroscience education.

ModelDB and other online sources of models
Where are they and what do they have?
Moderator: tom_morse

Specific models
Discussions of particular models.
Moderator: tom_morse

Policies and procedures
What do funding agencies and journals say about data sharing, especially of models? What mechanisms for sharing models exist or are in the works?
Moderator: tom_morse

General questions and discussions about computational neuroscience

Employment and educational opportunities
Faculty positions, requests and offers for consulting, postdoctoral openings, etc.