NEURON Summer Course
H
ANDS-ON
E
XERCISES
Table of Contents
1. Lipid Bilayer
3
2. Hodgkin - Huxley axon
5
3. Ball - Stick model
7
4. Model Control : Arbitrary forcing functions
23
5. Model Control : Simulation Families
29
6. Model Control : Inhomogeneous range variables
37
7. NMODL : HH type channels
47
8. NMODL : Kinetic Scheme : potassium channel
51
9. NMODL : Kinetic Scheme : calcium pump
73
10. MODLUNIT : changing pump units to picomoles/cm
2
77
11. NMODL : Parameter Discontinuities : pulse stimulus
83
12. NMODL : Synapse : Sudden conductance change with exponential decay
85
13. NMODL : Synapse : G protein
91
14. Working with PostScript and idraw figures
97
15. Working with morphometric data
109
16. Vector/Matrix : Reading data
119
17. Vector/Matrix : Subtracting linear response
125
18. Network : cell templates and network connections
127
19. Analyzing electrotonus
131
Informal extras
Some useful hoc idioms
139
A short idraw exercise
141
SIMCTRL: Simulation Control for NEURON
by Bill Lytton
(remote)
MyFirstNEURON
by Arthur Houweling
(remote)
NEURON summer course
Copyright © 1998, 1999 by N.T. Carnevale and M.L. Hines, all rights reserved.