Reference 3 neuron.exe 3 general 3 keywords 3 functions 3 classes 4 tools 4 neuron 4 keywords 4 classes 5 globals 5 GUI 5 LookAndFeel 5 Scene 5 View_equal_Plot 6 ZoomOut10 6 ZoomIn10 6 NewView 6 ZoomInOut 7 Translate 7 RoundView 7 WholeScene 7 SetView 7 Scene_equal_View 8 ObjectName 8 Browser 8 FieldEditor 8 Panel 9 Button 9 Menu 9 ValueEditor 10 DefaultValueEditor 10 PWM 10 ScreenItem 11 PaperItem 11 Help 11 Print 12 PrintToFile 12 PostScript 12 Idraw 12 Ascii 12 Session 13 Retrieve 13 SaveSelected 13 SaveAll 13 Other 13 SelectPrinter 14 WindowTitlesPrinted 14 VirtualScreen 14 LandPort 14 Tray 15 Quit 15 Graph 15 Crosshair 15 PlotWhat 16 PickVector 16 PlotRange 16 ChangeColor-Brush 16 AxisType 17 ViewAxis 17 NewAxis 17 ViewBox 17 KeepLines 17 FamilyLabel 18 Erase 18 MoveText 18 ChangeText 18 Delete 18 PlotShape 19 Section 19 Rotate3D 19 ShapeStyle 20 PlotWhat 20 VariableScale 20 TimePlot 20 SpacePlot 20 ShapePlot 21 MoveText 21 Deck 21 intercept 23 map 23 unmap 24 save 24 flip_to 25 remove_last 25 remove 25 File 26 ropen 27 wopen 27 aopen 27 xopen 28 close 28 printf 28 scanvar 28 scanstr 29 gets 29 getname 29 eof 30 isopen 30 chooser 30 vwrite 31 vread 31 seek 32 tell 32 Graph 33 axis 34 xaxis 34 yaxis 35 addvar 36 addexpr 37 begin 38 plot 38 xexpr 39 flush 40 fastflush 41 family 42 vector 42 getline 43 erase 44 erase_all 44 size 44 label 45 fixed 45 vfixed 46 relative 46 align 46 color 47 brush 48 view 48 save_name 49 beginline 49 line 50 mark 51 crosshair 51 view_count 52 unmap 53 printfile 53 exec_menu 53 menu_action 54 menu_tool 54 gif 55 GUIMath 55 d2line 56 d2line_seg 56 inside 56 List 57 append 57 prepend 57 insrt 58 remove 58 remove_all 58 index 59 count 59 browser 59 selected 60 select 60 select_action 61 accept_action 61 object 62 Matrix 62 x 64 nrow 65 ncol 65 resize 66 c 66 bcopy 67 getval 67 printf 68 fprint 68 scanf 69 mulv 69 getrow 70 getcol 71 getdiag 71 solv 72 mulm 73 add 74 muls 74 setrow 75 setcol 75 setdiag 76 zero 77 ident 77 exp 77 pow 78 inverse 79 transpose 79 symmeig 80 Pointer 81 val 81 s 82 Random 82 ACG 83 MLCG 83 repick 84 play 84 uniform 85 discunif 85 normal 85 lognormal 86 poisson 87 binomial 88 geometric 89 hypergeo 90 negexp 90 erlang 91 weibull 91 StringFunctions 91 len 92 substr 92 head 92 tail 92 right 93 left 93 is_name 93 SymChooser 94 run 95 text 95 HBox 95 VBox 95 intercept 96 map 97 unmap 98 save 98 ref 98 dismiss_action 99 dialog 99 Vector 100 x 102 size 102 resize 103 buffer_size 104 get 104 set 105 fill 105 label 106 record 106 play 108 play_remove 109 indgen 109 append 110 insrt 111 remove 111 contains 111 copy 112 c 113 cl 114 at 114 where 115 indwhere 116 indvwhere 116 fwrite 117 fread 118 vwrite 118 vread 119 printf 120 scanf 120 plot 121 line 122 ploterr 123 mark 124 histogram 124 hist 125 sumgauss 126 smhist 126 ind 127 addrand 127 setrand 128 sin 129 apply 129 reduce 129 interpolate 130 deriv 131 integral 132 median 134 medfltr 134 sort 134 sortindex 135 reverse 135 rotate 136 rebin 137 pow 137 sqrt 138 log 138 log10 138 tanh 138 abs 139 index 139 min 140 min_ind 140 max 141 max_ind 141 sum 141 sumsq 141 mean 142 var 142 stdev 142 stderr 143 dot 143 mag 143 add 144 sub 144 mul 144 div 145 scale 145 eq 145 meansqerr 145 Fourier 146 correl 146 convlv 146 spctrm 147 filter 147 fft 148 fit 151 trigavg 153 spikebin 154 psth 154 inf 155 resample 156 ivoc_style 156 variable_domain 157 chdir 157 units 158 checkpoint 158 dialogs 159 boolean_dialog 159 continue_dialog 160 string_dialog 160 IO 160 hoc_stdio 160 printf 161 xred 162 getstr 163 sred 163 fscan 164 ropen 165 wopen 165 xopen 166 fprint 166 Notification 167 doEvents 167 doNotify 167 obsolete 167 fmenu 168 lw 168 graphmode 169 graph 169 axis 171 plotx 171 ploty 171 regraph 172 plot 172 setcolor 173 settext 173 plt 173 print_session 175 save_session 176 prmat 176 solve 176 eqinit 176 sprint 176 strcmp 177 startsw 177 stopsw 177 object_id 177 allobjectvars 178 allobjects 178 numarg 178 hoc_pointer_ 179 execute 179 execute1 179 load_proc 180 load_file 181 load_func 182 load_template 182 machine_name 182 saveaudit 182 retrieveaudit 182 coredump_on_error 182 quit 183 object_push 183 object_pop 183 show_errmess_always 184 name_declared 184 button-menu-panel 184 xpanel 185 xbutton 185 xstatebutton 185 xcheckbox 186 xradiobutton 186 xmenu 187 xlabel 187 xvarlabel 188 xvalue 188 xpvalue 189 xfixedvalue 189 xslider 189 pwman_place 190 math 190 sin 191 cos 191 atan 191 tanh 191 log 191 log10 191 exp 191 sqrt 192 int 192 abs 192 erf 192 erfc 192 sscanf 192 symbols 194 system 195 stopwatch 195 help 196 return 196 break 197 continue 198 stop 199 if 199 else 200 while 200 for 201 print 202 delete 202 read 203 debug 203 double 204 em 204 depvar 205 eqn 206 local 206 strdef 207 setpointer 208 insert 208 uninsert 208 syntax 209 comments 209 expression 209 statement 210 proc 211 func 212 iterator 213 arguments 213 ObjectOrientedProgramming 214 begintemplate 215 endtemplate 215 objectvar 216 objref 216 public 217 external 217 new 218 predeclared-variables 219 float_epsilon 219 hoc_ac_ 219 hoc_obj_ 220 hoc_cross_x_ 220 hoc_cross_y_ 220 Constants 221 CVode 221 solve 222 statistics 223 rtol 223 atol 223 abstol 224 re_init 225 stiff 225 active 225 maxorder 226 jacobian 226 states 227 dstates 227 statename 227 netconlist 228 record 229 ModelDescriptionIssues 229 Channels 230 Concentrations 230 Events 230 Impedance 232 loc 232 compute 232 transfer 233 input 233 ratio 233 transfer_phase 234 input_phase 234 MechanismStandard 235 panel 235 action 236 in 237 out 237 set 238 get 238 save 238 count 238 name 239 MechanismType 239 select 240 selected 240 remove 241 make 241 count 241 menu 242 action 242 NetCon 242 valid 243 active 244 syn 244 pre 244 preloc 245 postloc 245 precell 246 postcell 246 prelist 246 synlist 247 postcelllist 247 precelllist 247 delay 248 weight 248 threshold 249 x 249 PlotShape 249 scale 250 view 250 size 250 view_count 250 show 251 flush 251 fastflush 251 variable 251 save_name 251 unmap 252 printfile 252 menu_action 252 menu_tool 252 observe 252 nearest 253 push_selected 253 exec_menu 253 erase 253 erase_all 253 beginline 254 line 254 mark 254 label 254 color 254 color_all 255 color_list 255 colormap 255 hinton 256 RangeVarPlot 257 begin 258 end 258 origin 258 left 259 right 259 list 259 color 260 SaveState 260 save 260 restore 260 fread 261 fwrite 261 writehoc 262 SectionBrowser 262 select 262 select_action 263 accept_action 263 SectionList 264 append 264 remove 264 printnames 265 SectionRef 265 sec 265 Shape 266 view 267 size 267 show 267 flush 268 observe 268 view_count 268 select 269 action 269 color 269 color_all 270 color_list 270 point_mark 270 point_mark_remove 271 save_name 271 unmap 271 printfile 271 menu_action 272 exec_menu 272 erase 272 erase_all 272 beginline 273 line 273 mark 273 label 273 menu_tool 273 nearest 274 push_selected 275 nrnglobalmechmenu 275 nrnmechmenu 276 nrnpointmenu 276 nrnsecmenu 276 Section 277 Geometry 277 pt3dclear 282 pt3dadd 282 pt3dconst 283 n3d 283 x3d 284 y3d 284 z3d 284 diam3d 285 arc3d 285 spine3d 285 setSpineArea 286 getSpineArea 286 define_shape 286 area 287 ri 287 distance 287 diam_changed 288 L 288 diam 288 Ra 289 pointprocesses 289 IClamp 289 AlphaSynapse 290 VClamp 290 SEClamp 292 APCount 293 mechanisms 294 hh 294 pas 294 fastpas 295 extracellular 295 functions 299 batch_run 299 batch_save 299 initnrn 300 fadvance 301 finitialize 301 fstim 301 fstimi 302 fit_praxis 302 attr_praxis 303 pval_praxis 303 stop_praxis 304 fclamp 304 fclampi 304 fclampv 305 prstim 305 fcurrent 305 fmatrix 306 issection 306 ismembrane 307 sectionname 308 secname 308 psection 309 secondorder 309 t 309 dt 310 clamp_resist 310 celsius 310 this_section 310 this_node 311 parent_section 311 parent_node 311 parent_connection 312 section_orientation 312 CompileTimeOptions 312 ion 313 ion_style 314 ghk 315 nernst 315 CurrentlyAccessedSection 316 access 317 forall 318 ifsec 319 forsec 319 pop_section 320 push_section 320 Topology 321 create 321 connect 322 topology 323 delete_section 323 disconnect 323 nseg 324 NMODL 325 ModelDescriptionLanguage 325 Introduction 325 History 326 Usage 326 Rationale 327 GeneralParadigm 327 BasicNMODLStatements 329 Parameter 329 State 329 Assigned 330 Constant 330 Local 330 Independent 330 Include 332 Breakpoint 332 Derivative 333 Nonlinear 333 Kinetic 334 Procedure 334 Function 335 Table 335 Initial 336 NMODLtoNEURON 336 Neuron 337 Suffix 337 Range 338 Global 338 Nonspecific_Current 338 NMODLtoNEURON 338 Neuron 339 Suffix 339 Range 340 Global 340 Nonspecific_Current 340 Useion 341 Read 341 Write 342 Valence 342 Point_Process 343 Pointer 344 External 344 ConnectingMechanismsTogether 344 Pointer-Communication 345 ProjectManagement 346 prjnrninit 348 prjnrncmp 349 prjnrnco 349 prjnrnci 349 prjnrnpr 350 ivdialog 351 StandardRunWidgets 351 NEURONMainPanel 351 Quiet 352 RealTime 352 celsius 352 AxialResistivity 352 RunControl 352 PointProcesses 353 DistributedMechanisms 353 Managers 353 Inserter 353 HomogeneousSpec 353 Viewers 353 ShapeName 353 NameValues 354 MechanismsGlobals 354 NewGraph 354 Voltageaxis 354 Currentaxis 354 Stateaxis 354 Shapeplot 355 VectorMovie 355 PhasePlane 355 Grapher 355 Miscellaneous 355 Clipboard 356 GatherValues 356 VectorPlay 356 VectorWrapper 356 Family 356 Family 357 Command 357 ParameterizedFunction 357 RunFitter 357 Impedance 357 Frequency 357 Path 358 LogAvsX 358 Shape 358 ArchiveAndHardcopy 358 ImpedanceTools 358 ImpShape 359 Electrode 359 IClamp 360 del 360 dur 360 amp 360 VClamp 360 dur0 361 amp0 361 VClampigraph 361 VClampFamily 361 Testlevel 361 Holding 362 Returnlevel 362 Location 362 Family 362 ExecCommand 363 GatherVec 363 VectorPlay 363 VecWrap 363 FunctionFitter 364 Plot 364 Steps 364 IndependentVar 364 Args 364 Yexpr 364 PraxisFit 365 StopAtNextQuadForm 365 Running 365 WatchTheFit 365 RoughFit 365 ArgValues 365 CurrentValuesAsDefault 366 FittoData 366 ReadDataFile 366 CommonFunctionalForms 366 FitCriterion 366 ParameterRangeLimits 366 DataWeights 366 SaveRestoreFunction 367 Grapher 367 Plot 368 EraseAll 369 Steps 369 IndependentVar 369 Generator 369 IndepBegin 369 IndepEnd 369 Xexpr 370 Impx 370 LogAvsX 370 ImpedanceRatio 371 Inserter 371 Managers 371 PointManager 372 PointGroup 372 Electrode 372 Viewers 372 PointProcesses 372 PointProcessManager 373 PointProcessGroupManager 373 RunControl 374 t 374 dt 374 InitRun 374 Init 375 Stop 375 Continuetil 375 Continuefor 376 SingleStep 376 Tstop 376 Plotsms 376 RunFitter 376 ReadData 377 CurrentValuesAsDefault 377 Variabletofit 378 Parameterstovary 378 Extras 378 DataWeights 378 ParameterRanges 379 Changeparmfromlist 379 Removeparmfromlist 379 SaveRestoreFitParams 379 NumberOfDataRegions 379 AnotherVariableToFit 380 Dofit 380 SingleRunFit 380 StopatnextQuadForm 380 Running 381 Roughfit 381 BeQuiet 381 MenuExplore 381 PointProcessLocator 382 ShapeBrowser 382 ShowMechanism 382 MechType 382