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NEURON hacks
Particularly useful chunks of hoc and/or NMODL code. May be pedestrian or stunningly brilliant, may make you gasp or bring tears to your eyes, but always makes you think "I wish I had written that; I'm sure going to steal it."
- 15 Topics
- 46 Posts
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Last post by OspreyNeurons
Tue Jun 18, 2013 10:50 pm
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Hot tips
A collection of noteworthy items selected by our moderators from discussions about making and using models with NEURON.
Moderators: wwlytton, tom_morse
- 62 Topics
- 65 Posts
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Last post by ted
Sat Mar 02, 2013 11:48 pm
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Getting started
The basics of how to develop, test, and use models.
- 463 Topics
- 1961 Posts
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Last post by ted
Fri Jun 14, 2013 9:56 am
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The GUI
Using the graphical user interface to build and exercise models. Includes customizing the GUI by writing a little bit of hoc.
- 66 Topics
- 233 Posts
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Last post by ted
Tue Apr 09, 2013 11:28 am
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Anatomically detailed models
Managing anatomically complex model cells with the CellBuilder. Importing morphometric data with NEURON's Import3D tool or Robert Cannon's CVAPP. Where to find detailed morphometric data.
- 124 Topics
- 606 Posts
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Last post by ted
Wed May 29, 2013 11:51 am
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Adding new mechanisms and functions to NEURON
NMODL and the Channel Builder.
- 343 Topics
- 1659 Posts
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Last post by bosleyjr
Tue Jun 18, 2013 5:18 pm
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Modeling networks
Moderator: wwlytton
- 155 Topics
- 630 Posts
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Last post by ted
Thu Jun 13, 2013 1:22 pm
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Optimization
Using the Multiple Run Fitter, praxis, etc..
- 49 Topics
- 183 Posts
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Last post by ted
Sat Apr 20, 2013 5:55 pm
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Parallel NEURON
General issues of interest both for network and
individual cell parallelization.
Moderator: hines
- 99 Topics
- 482 Posts
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Last post by hines
Mon Feb 11, 2013 12:31 pm
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Other questions
Anything that doesn't fit elsewhere.
- 461 Topics
- 1918 Posts
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Last post by ted
Mon Jun 17, 2013 10:16 am
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- How to implement temperature dependent rates
by ted » Wed Mar 15, 2006 1:15 pm
- 3 Replies
- 2096 Views
- Last post by bosleyjr
Tue Jun 18, 2013 4:59 pm
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- "My mechanisms don't load!"
by ted » Wed Aug 11, 2010 10:30 am
- 3 Replies
- 1589 Views
- Last post by stil
Wed Jun 06, 2012 12:17 pm
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- Rescaling graphs and setting axis ranges
by ted » Fri Oct 31, 2008 10:32 am
- 0 Replies
- 1658 Views
- Last post by ted
Fri Oct 31, 2008 10:32 am
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- Do you really have n usable processors?
by hines » Mon Oct 15, 2007 10:53 am
- 0 Replies
- 2586 Views
- Last post by hines
Mon Oct 15, 2007 10:53 am
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- Suggestions for how to develop models
by ted » Thu Jul 05, 2007 9:18 pm
- 0 Replies
- 3833 Views
- Last post by ted
Thu Jul 05, 2007 9:18 pm
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- Block sequence in NMODL
by ted » Thu Aug 31, 2006 11:05 am
- 0 Replies
- 3351 Views
- Last post by ted
Thu Aug 31, 2006 11:05 am
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- Adding new mechanisms to NEURON
by ted » Thu Dec 15, 2005 5:35 pm
- 1 Replies
- 6022 Views
- Last post by ted
Thu Aug 03, 2006 5:11 pm
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- Secrets of NEURON: the hoc library
by ted » Thu Jul 13, 2006 1:31 pm
- 0 Replies
- 3989 Views
- Last post by ted
Thu Jul 13, 2006 1:31 pm
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- Exploit NEURON's GUI tools
by ted » Thu Sep 08, 2005 6:52 pm
- 0 Replies
- 3846 Views
- Last post by ted
Thu Sep 08, 2005 6:52 pm
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- Help for the total beginner
by ted » Thu Sep 08, 2005 5:16 pm
- 0 Replies
- 7592 Views
- Last post by ted
Thu Sep 08, 2005 5:16 pm
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- Where to learn about mod files and NMODL
by ted » Thu May 19, 2005 10:11 pm
- 0 Replies
- 4556 Views
- Last post by ted
Thu May 19, 2005 10:11 pm
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- Automatically run multiple simulations.
by OspreyNeurons » Tue Jun 18, 2013 10:50 pm
- 0 Replies
- 3 Views
- Last post by OspreyNeurons
Tue Jun 18, 2013 10:50 pm
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- (1/1+Boltzmann)^4 parameters: a secret decoder ring?
by bosleyjr » Wed Jun 12, 2013 3:28 pm
- 3 Replies
- 27 Views
- Last post by bosleyjr
Tue Jun 18, 2013 5:18 pm
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- Changing synaptic conductance during a sequence of events
by maria diamantaki » Fri Jun 14, 2013 3:53 pm
- 7 Replies
- 42 Views
- Last post by ted
Mon Jun 17, 2013 10:16 am
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- getstr
by arunanirudhan1 » Fri Jun 14, 2013 4:05 am
- 1 Replies
- 17 Views
- Last post by ted
Fri Jun 14, 2013 9:56 am
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- model of saturating synaptic transmission
by shyam_u2 » Wed Jun 12, 2013 2:09 am
- 3 Replies
- 15 Views
- Last post by ted
Fri Jun 14, 2013 12:17 am
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- How to recognize the source of a spike in NET_RECEIVE?
by BlueBirdFlies » Thu Jun 13, 2013 11:12 am
- 1 Replies
- 18 Views
- Last post by ted
Thu Jun 13, 2013 1:22 pm
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- Help with Procedure!
by Martenzi » Tue Jun 04, 2013 3:19 am
- 14 Replies
- 111 Views
- Last post by ted
Sun Jun 09, 2013 11:25 am
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- Segmentation Violation 7.3
by Martenzi » Sun Jun 09, 2013 1:34 am
- 5 Replies
- 26 Views
- Last post by ted
Sun Jun 09, 2013 11:03 am
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- extracellular stimulation and adaptive integration
by costas » Mon Mar 09, 2009 6:36 pm
- 2 Replies
- 627 Views
- Last post by ted
Tue Jun 04, 2013 9:59 pm
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- Problems with randomizing point process noise
by bscoventry » Thu May 23, 2013 4:35 pm
- 5 Replies
- 73 Views
- Last post by bscoventry
Wed May 29, 2013 2:05 pm
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- return double array
by oren » Wed May 29, 2013 7:17 am
- 1 Replies
- 29 Views
- Last post by ted
Wed May 29, 2013 12:15 pm
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- Connect axon to dendrite
by mmvpgs » Wed May 29, 2013 5:15 am
- 1 Replies
- 32 Views
- Last post by ted
Wed May 29, 2013 11:51 am
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- Cannot Find X11
by OspreyNeurons » Sun May 26, 2013 8:07 pm
- 3 Replies
- 27 Views
- Last post by ted
Mon May 27, 2013 1:56 pm
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- pause/freeze plot
by oren » Wed May 22, 2013 5:16 pm
- 4 Replies
- 40 Views
- Last post by oren
Sun May 26, 2013 12:06 pm
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- Setting Resting Membrane Potential
by shailesh » Wed May 15, 2013 4:46 am
- 6 Replies
- 104 Views
- Last post by ted
Fri May 24, 2013 9:22 am
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- Adding a length scale bar to a Shape plot
by neuromau » Tue May 21, 2013 8:03 pm
- 2 Replies
- 23 Views
- Last post by neuromau
Wed May 22, 2013 8:58 pm
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- lambda_f undefined function - when used inside template
by shailesh » Mon May 13, 2013 12:43 am
- 3 Replies
- 43 Views
- Last post by ted
Mon May 13, 2013 9:58 pm
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- ionic current recording
by xiaosage » Mon May 13, 2013 4:10 am
- 1 Replies
- 43 Views
- Last post by ted
Mon May 13, 2013 11:18 am
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- question about hocmech()
by ximmingli » Wed May 08, 2013 8:08 pm
- 3 Replies
- 56 Views
- Last post by ximmingli
Thu May 09, 2013 11:01 am
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- Current record and plot
by Hessum » Tue May 07, 2013 2:01 pm
- 1 Replies
- 48 Views
- Last post by ted
Wed May 08, 2013 9:40 am
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- cvode.record problem
by Bill Holmes » Mon Apr 29, 2013 2:59 pm
- 6 Replies
- 63 Views
- Last post by ted
Wed May 01, 2013 11:29 am
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- place dot on neuron
by pfortier » Wed Apr 24, 2013 12:02 pm
- 4 Replies
- 84 Views
- Last post by pfortier
Thu Apr 25, 2013 4:06 pm
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- using MRF for fitting two outputs at same time
by shyam_u2 » Tue Apr 16, 2013 12:11 pm
- 1 Replies
- 352 Views
- Last post by ted
Sat Apr 20, 2013 5:55 pm
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- nrniv hide launched process
by JimH » Mon Apr 15, 2013 4:11 pm
- 4 Replies
- 398 Views
- Last post by JimH
Fri Apr 19, 2013 10:20 pm
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- Optimizing PROCEDURE equations in mod files
by neuromau » Fri Apr 12, 2013 8:04 pm
- 3 Replies
- 90 Views
- Last post by neuromau
Mon Apr 15, 2013 6:53 pm
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- Trouble with NEURON 7.3
by pascal » Sun Mar 24, 2013 6:00 pm
- 3 Replies
- 122 Views
- Last post by ted
Mon Apr 15, 2013 11:17 am
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- Shape shape plot in hoc
by adamimos » Thu Apr 11, 2013 2:09 pm
- 3 Replies
- 68 Views
- Last post by ted
Fri Apr 12, 2013 11:07 am
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- mixed model of artificial and conduction-based cells
by rth » Tue Apr 09, 2013 12:07 pm
- 15 Replies
- 513 Views
- Last post by rth
Thu Apr 11, 2013 5:18 pm
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- How to iterate over all states of all mechanisms in a sec?
by hhshih » Wed Apr 10, 2013 6:05 pm
- 2 Replies
- 358 Views
- Last post by hhshih
Thu Apr 11, 2013 9:54 am
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- NMDA & GUI
by Martenzi » Sat Apr 06, 2013 3:31 am
- 16 Replies
- 497 Views
- Last post by ted
Tue Apr 09, 2013 11:28 am
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- Running two simulations
by shyam_u2 » Sat Apr 06, 2013 12:27 pm
- 1 Replies
- 44 Views
- Last post by ted
Mon Apr 08, 2013 10:28 am
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- Vaa3d swc files
by oren » Sat Apr 06, 2013 4:11 pm
- 2 Replies
- 416 Views
- Last post by oren
Mon Apr 08, 2013 9:25 am
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- check validity of DLL files
by Martenzi » Sat Apr 06, 2013 11:54 pm
- 1 Replies
- 405 Views
- Last post by ted
Sun Apr 07, 2013 4:02 pm
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- Differences in simulation results
by adamimos » Thu Apr 04, 2013 9:26 pm
- 1 Replies
- 45 Views
- Last post by ted
Thu Apr 04, 2013 11:43 pm
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- Adding randomness to NetCon "delay"
by iamdescartes » Fri Mar 29, 2013 2:23 pm
- 5 Replies
- 84 Views
- Last post by ted
Thu Apr 04, 2013 10:57 am
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- implementing recovery from inactivation
by fabien tell » Tue Mar 26, 2013 6:37 am
- 7 Replies
- 518 Views
- Last post by ted
Tue Apr 02, 2013 12:14 pm
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- How to use area(x) and L
by charles1 » Sun Mar 31, 2013 3:03 pm
- 3 Replies
- 62 Views
- Last post by ted
Tue Apr 02, 2013 12:11 pm
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- Important Distinction!
by Martenzi » Sun Mar 31, 2013 8:41 pm
- 1 Replies
- 45 Views
- Last post by ted
Sun Mar 31, 2013 9:38 pm
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- Issues with Saving and Retrieving
by Martenzi » Mon Mar 11, 2013 9:42 pm
- 5 Replies
- 103 Views
- Last post by ted
Sun Mar 31, 2013 9:09 pm
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