Search found 18 matches
- Wed Jun 21, 2023 10:50 am
- Forum: Employment and educational opportunities
- Topic: Computational neuroscience postdoc position at NKI
- Replies: 0
- Views: 34831
Computational neuroscience postdoc position at NKI
A postdoctoral scientist position is available at the Nathan Kline Institute (NKI) for Psychiatric Research (https://www.nki.rfmh.org) to work on computational neuroscience research funded by recently awarded grants. Our NIH-funded project investigates the brain's dynamic circuit motifs underlying i...
- Thu Jan 06, 2022 9:33 am
- Forum: Employment and educational opportunities
- Topic: Undergraduate Computational Neuroscience Position
- Replies: 0
- Views: 39901
Undergraduate Computational Neuroscience Position
Several Army Research Office (ARO) undergraduate research apprenticeship program (URAP) positions are available for the summer of 2022 at the Nathan Kline Institute for Psychiatric Research (https://www.nki.rfmh.org/). Research will be conducted to help achieve the goals of an ARO grant that aims to...
- Wed Jan 27, 2021 10:33 am
- Forum: Employment and educational opportunities
- Topic: Undergrad computational neuroscience position
- Replies: 0
- Views: 42197
Undergrad computational neuroscience position
A new Army Research Office (ARO) undergraduate research apprenticeship program (URAP) position is available for the summer of 2021 at the Nathan Kline Institute for Psychiatric Research in Orangeburg, NY (https://www.nki.rfmh.org/). Research will be conducted under the mentorship of Samuel Neymotin,...
- Mon Feb 03, 2020 9:24 am
- Forum: Employment and educational opportunities
- Topic: Undergrad computational neuroscience position
- Replies: 0
- Views: 42922
Undergrad computational neuroscience position
A new paid opportunity for an Army Research Office (ARO) sponsored undergraduate research apprenticeship program (URAP) position is available for the summer of 2020 at the Nathan Kline Institute for Psychiatric Research in Orangeburg, NY (https://www.nki.rfmh.org/). The research will be conducted to...
- Tue Nov 13, 2018 12:45 pm
- Forum: Employment and educational opportunities
- Topic: Postdoc in auditory thalamocortical system modeling & data analysis
- Replies: 0
- Views: 26326
Postdoc in auditory thalamocortical system modeling & data analysis
A computational neuroscience postdoctoral position is available at the Nathan Kline Institute for Psychiatric Research under the auspices of a NIH R01 (MPI: Peter Lakatos, Sam Neymotin). The aim of our project is to develop/utilize computer models of the auditory thalamocortical system to investigat...
- Tue Oct 30, 2018 10:34 am
- Forum: HNN: Human Neocortical Neurosolver
- Topic: HNN at SFN 2018
- Replies: 0
- Views: 28005
HNN at SFN 2018
We are pleased to announce that we will be presenting the following HNN workshops, posters, and related research at the Society for Neuroscience Annual Meeting in San Diego in November. Computational Psychiatry: http://computationalpsychiatry.org/cp18/ When: 11/2, 11:00 AM - 12:20 PM Lecture – Steph...
- Thu Oct 11, 2018 3:20 pm
- Forum: HNN: Human Neocortical Neurosolver
- Topic: Tutorials on simulating ERPs/Rhythms using HNN
- Replies: 2
- Views: 25416
Re: Tutorials on simulating ERPs/Rhythms using HNN
Poisson inputs are recorded and saved by HNN. The format of spk.txt is: column 1 = spike times, column 2 = identifier If you look at param.txt you will see a line with something like this: extpois: [1350, 1619] that indicates that identifiers 1350 through 1619 are associated with Poisson inputs. You...
- Wed Sep 05, 2018 11:05 am
- Forum: HNN: Human Neocortical Neurosolver
- Topic: Tutorials on simulating ERPs/Rhythms using HNN
- Replies: 2
- Views: 25416
Tutorials on simulating ERPs/Rhythms using HNN
We recently released a new set of tutorials ( https://hnn.brown.edu/index.php/tutorials/ ), describing how to use HNN to simulate some of the most commonly observed patterns in MEG/EEG data, including event related potentials, and low frequency rhythms (alpha/beta/gamma). We welcome any feedback/com...
- Wed Sep 05, 2018 11:01 am
- Forum: HNN: Human Neocortical Neurosolver
- Topic: Installation Issues
- Replies: 4
- Views: 23499
Installation Issues
If anyone has installation issues/questions, please let us know. We can help troubleshoot any problems here. Also note, that to simplify the HNN installation process, we have created Virtual Box application images, available at https://hnn.brown.edu/ .
- Fri May 11, 2018 4:39 pm
- Forum: HNN: Human Neocortical Neurosolver
- Topic: HNN: Human Neocortical Neurosolver
- Replies: 0
- Views: 15899
HNN: Human Neocortical Neurosolver
We recently built the Human Neocortical Neurosolver (HNN; https://hnn.brown.edu), a user-friendly software tool that gives researchers/clinicians the ability to test and develop hypotheses on circuit mechanisms underlying EEG/MEG data in an easy-to-use environment. The foundation of HNN is a computa...
- Fri Jan 01, 2016 11:31 am
- Forum: Reaction-diffusion in NEURON
- Topic: New multiscale (molecular/net) neocortex model on ModelDB
- Replies: 0
- Views: 11503
New multiscale (molecular/net) neocortex model on ModelDB
A new paper, Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex, was recently accepted to Neuroscience . The paper describes a model that links molecular to neuronal network dynamics using NEURON's reaction-diffusion module. The model is available here...
- Thu Dec 18, 2014 1:23 pm
- Forum: Reaction-diffusion in NEURON
- Topic: New reaction-diffusion model on ModelDB
- Replies: 6
- Views: 11327
New reaction-diffusion model on ModelDB
A new paper, Neuronal calcium wave propagation varies with changes in endoplasmic reticulum parameters: a computer model , was recently accepted to Neural Computation . The paper describes an electrochemical model that uses NEURON's new reaction-diffusion features, and may therefore serve as a templ...
- Wed Jun 18, 2014 4:11 am
- Forum: Reaction-diffusion in NEURON
- Topic: Basic modelling question
- Replies: 7
- Views: 20040
Re: Basic modelling question
should cai increase = is there any current through your channel?
- Wed Jun 18, 2014 4:09 am
- Forum: Reaction-diffusion in NEURON
- Topic: Basic modelling question
- Replies: 7
- Views: 20040
Re: Basic modelling question
for access to continuerun you can do: h.load_file("stdrun.hoc")
can you post output showing the problem you're still having connecting rxd and the mod mechanism?
can you post output showing the problem you're still having connecting rxd and the mod mechanism?
- Wed Jun 04, 2014 12:25 pm
- Forum: Reaction-diffusion in NEURON
- Topic: Basic modelling question
- Replies: 7
- Views: 20040
Re: Basic modelling question
Hi Stephan, The setup looks correct. To link the calcium current in your mod file to changes in intracellular calcium concentration you should make sure you're using the ca ion in your mod file, eg with this: USEION ca READ cai,cao WRITE ica The name = 'ca' is required in your rxd.Species setup, whi...