Multiple Run Fitter
Posted: Tue Jul 10, 2007 3:14 pm
I am trying to fit the Recovery Cycle data from the existing model
with the experimental data. However, since the Recovery cycle data are
obtained from analyzing the results of many runs, rather than just 1
run as in the tutorial. Specically, my hoc file does:
- Run once, determine if there is an action potential
- continue with binary search until find out the threshold current
- change the inter-stimulus delay and perform the threshold tracking again
- after each loop, the threshold and delay are save into a matrix
called Fitdata
Hence, I would like set up the Fitter to run the whole process of
Recovery Cycle each time it generates an Error Value. However, I have
2 difficulties:
- How to use the matrix Fitdata as the Fitness Variable since it
does not appear in the list
- How to set up the Fitter to run the whole process of Recovery
Cycle (the procedure is contained in the proc "recov()")
Thanks
with the experimental data. However, since the Recovery cycle data are
obtained from analyzing the results of many runs, rather than just 1
run as in the tutorial. Specically, my hoc file does:
- Run once, determine if there is an action potential
- continue with binary search until find out the threshold current
- change the inter-stimulus delay and perform the threshold tracking again
- after each loop, the threshold and delay are save into a matrix
called Fitdata
Hence, I would like set up the Fitter to run the whole process of
Recovery Cycle each time it generates an Error Value. However, I have
2 difficulties:
- How to use the matrix Fitdata as the Fitness Variable since it
does not appear in the list
- How to set up the Fitter to run the whole process of Recovery
Cycle (the procedure is contained in the proc "recov()")
Thanks