Running Models from ModelDB
Posted: Thu Sep 25, 2014 12:43 pm
Hi, I'm new to NEURON and I tried running one of the models from ModelDB. Specifically, I'm trying to run the Spinal Motor Neuron (McIntyre et al 2002). I've installed NEURON and downloaded the zip file for this model.
I've tried running the model by double clicking mosinit.hoc. I get this error message:
When I tried running MRGaxon.hoc, I get this instead:
I'm probably doing something wrong, but I'm not sure what. Are there environment variables that I need to have? Am I putting the files in the wrong folder?
Thank you very much for your help!
I've tried running the model by double clicking mosinit.hoc. I get this error message:
Code: Select all
NEURON -- VERSION 7.3 ansi (1078:2b0c984183df) 2014-04-04
Duke, Yale, and the BlueBrain Project -- Copyright 1984-2014
See http://www.neuron.yale.edu/neuron/credits
1
1
nrniv: syntax error
in MRGaxon.hoc near line 80
insert axnode
^
xopen("MRGaxon.hoc")
oc>
Code: Select all
NEURON -- VERSION 7.3 ansi (1078:2b0c984183df) 2014-04-04
Duke, Yale, and the BlueBrain Project -- Copyright 1984-2014
See http://www.neuron.yale.edu/neuron/credits
cygwin warning:
MS-DOS style path detected: \Program Files (x86)\OpenLibraries\python
Preferred POSIX equivalent is: /cygdrive/c/Program Files (x86)/OpenLibraries/p ython
CYGWIN environment variable option "nodosfilewarning" turns off this warning.
Consult the user's guide for more details about POSIX paths:
http://cygwin.com/cygwin-ug-net/using.html#using-pathnames
: not foundd.sh: 2: /lib/hocload.sh:
: not foundd.sh: 5: /lib/hocload.sh:
: not foundd.sh: 8: /lib/hocload.sh:
/lib/hocload.sh: 24: /lib/hocload.sh: Syntax error: word unexpected (expecting " do")
nrniv: can't run: $NEURONHOME/lib/hocload.sh proc nrnmainmenu 1
in MRGaxon.hoc near line 18
load_proc("nrnmainmenu")
^
load_proc("nrnmainmenu")
oc>
Thank you very much for your help!