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NEURON hacks
Particularly useful chunks of hoc and/or NMODL code. May be pedestrian or stunningly brilliant, may make you gasp or bring tears to your eyes, but always makes you think "I wish I had written that; I'm sure going to steal it."
- 14 Topics
- 45 Posts
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Last post by hhshih
Thu Apr 11, 2013 9:54 am
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Hot tips
A collection of noteworthy items selected by our moderators from discussions about making and using models with NEURON.
Moderators: wwlytton, tom_morse
- 62 Topics
- 65 Posts
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Last post by ted
Sat Mar 02, 2013 11:48 pm
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Getting started
The basics of how to develop, test, and use models.
- 460 Topics
- 1953 Posts
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Last post by ted
Mon May 13, 2013 11:18 am
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The GUI
Using the graphical user interface to build and exercise models. Includes customizing the GUI by writing a little bit of hoc.
- 66 Topics
- 233 Posts
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Last post by ted
Tue Apr 09, 2013 11:28 am
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Anatomically detailed models
Managing anatomically complex model cells with the CellBuilder. Importing morphometric data with NEURON's Import3D tool or Robert Cannon's CVAPP. Where to find detailed morphometric data.
- 123 Topics
- 604 Posts
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Last post by pfortier
Thu Apr 25, 2013 4:06 pm
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Adding new mechanisms and functions to NEURON
NMODL and the Channel Builder.
- 341 Topics
- 1643 Posts
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Last post by bscoventry
Thu May 23, 2013 4:35 pm
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Modeling networks
Moderator: wwlytton
- 154 Topics
- 628 Posts
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Last post by rth
Thu Apr 11, 2013 5:18 pm
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Optimization
Using the Multiple Run Fitter, praxis, etc..
- 49 Topics
- 183 Posts
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Last post by ted
Sat Apr 20, 2013 5:55 pm
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Parallel NEURON
General issues of interest both for network and
individual cell parallelization.
Moderator: hines
- 99 Topics
- 482 Posts
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Last post by hines
Mon Feb 11, 2013 12:31 pm
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Other questions
Anything that doesn't fit elsewhere.
- 458 Topics
- 1883 Posts
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Last post by shailesh
Fri May 24, 2013 7:35 am
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- "My mechanisms don't load!"
by ted » Wed Aug 11, 2010 10:30 am
- 3 Replies
- 1558 Views
- Last post by stil
Wed Jun 06, 2012 12:17 pm
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- Rescaling graphs and setting axis ranges
by ted » Fri Oct 31, 2008 10:32 am
- 0 Replies
- 1648 Views
- Last post by ted
Fri Oct 31, 2008 10:32 am
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- Do you really have n usable processors?
by hines » Mon Oct 15, 2007 10:53 am
- 0 Replies
- 2580 Views
- Last post by hines
Mon Oct 15, 2007 10:53 am
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- Suggestions for how to develop models
by ted » Thu Jul 05, 2007 9:18 pm
- 0 Replies
- 3813 Views
- Last post by ted
Thu Jul 05, 2007 9:18 pm
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- Block sequence in NMODL
by ted » Thu Aug 31, 2006 11:05 am
- 0 Replies
- 3343 Views
- Last post by ted
Thu Aug 31, 2006 11:05 am
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- Adding new mechanisms to NEURON
by ted » Thu Dec 15, 2005 5:35 pm
- 1 Replies
- 6000 Views
- Last post by ted
Thu Aug 03, 2006 5:11 pm
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- Secrets of NEURON: the hoc library
by ted » Thu Jul 13, 2006 1:31 pm
- 0 Replies
- 3975 Views
- Last post by ted
Thu Jul 13, 2006 1:31 pm
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- How to implement temperature dependent rates
by ted » Wed Mar 15, 2006 1:15 pm
- 0 Replies
- 2072 Views
- Last post by ted
Wed Mar 15, 2006 1:15 pm
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- Exploit NEURON's GUI tools
by ted » Thu Sep 08, 2005 6:52 pm
- 0 Replies
- 3839 Views
- Last post by ted
Thu Sep 08, 2005 6:52 pm
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- Help for the total beginner
by ted » Thu Sep 08, 2005 5:16 pm
- 0 Replies
- 7549 Views
- Last post by ted
Thu Sep 08, 2005 5:16 pm
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- Where to learn about mod files and NMODL
by ted » Thu May 19, 2005 10:11 pm
- 0 Replies
- 4538 Views
- Last post by ted
Thu May 19, 2005 10:11 pm
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- Setting Resting Membrane Potential
by shailesh » Wed May 15, 2013 4:46 am
- 5 Replies
- 65 Views
- Last post by shailesh
Fri May 24, 2013 7:35 am
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- Problems with randomizing point process noise
by bscoventry » Thu May 23, 2013 4:35 pm
- 0 Replies
- 8 Views
- Last post by bscoventry
Thu May 23, 2013 4:35 pm
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- pause/freeze plot
by oren » Wed May 22, 2013 5:16 pm
- 1 Replies
- 11 Views
- Last post by ted
Thu May 23, 2013 9:40 am
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- Adding a length scale bar to a Shape plot
by neuromau » Tue May 21, 2013 8:03 pm
- 2 Replies
- 20 Views
- Last post by neuromau
Wed May 22, 2013 8:58 pm
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- lambda_f undefined function - when used inside template
by shailesh » Mon May 13, 2013 12:43 am
- 3 Replies
- 33 Views
- Last post by ted
Mon May 13, 2013 9:58 pm
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- ionic current recording
by xiaosage » Mon May 13, 2013 4:10 am
- 1 Replies
- 35 Views
- Last post by ted
Mon May 13, 2013 11:18 am
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- question about hocmech()
by ximmingli » Wed May 08, 2013 8:08 pm
- 3 Replies
- 47 Views
- Last post by ximmingli
Thu May 09, 2013 11:01 am
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- Current record and plot
by Hessum » Tue May 07, 2013 2:01 pm
- 1 Replies
- 33 Views
- Last post by ted
Wed May 08, 2013 9:40 am
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- cvode.record problem
by Bill Holmes » Mon Apr 29, 2013 2:59 pm
- 6 Replies
- 60 Views
- Last post by ted
Wed May 01, 2013 11:29 am
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- place dot on neuron
by pfortier » Wed Apr 24, 2013 12:02 pm
- 4 Replies
- 74 Views
- Last post by pfortier
Thu Apr 25, 2013 4:06 pm
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- using MRF for fitting two outputs at same time
by shyam_u2 » Tue Apr 16, 2013 12:11 pm
- 1 Replies
- 343 Views
- Last post by ted
Sat Apr 20, 2013 5:55 pm
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- nrniv hide launched process
by JimH » Mon Apr 15, 2013 4:11 pm
- 4 Replies
- 393 Views
- Last post by JimH
Fri Apr 19, 2013 10:20 pm
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- Optimizing PROCEDURE equations in mod files
by neuromau » Fri Apr 12, 2013 8:04 pm
- 3 Replies
- 81 Views
- Last post by neuromau
Mon Apr 15, 2013 6:53 pm
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- Trouble with NEURON 7.3
by pascal » Sun Mar 24, 2013 6:00 pm
- 3 Replies
- 84 Views
- Last post by ted
Mon Apr 15, 2013 11:17 am
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- Shape shape plot in hoc
by adamimos » Thu Apr 11, 2013 2:09 pm
- 3 Replies
- 64 Views
- Last post by ted
Fri Apr 12, 2013 11:07 am
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- mixed model of artificial and conduction-based cells
by rth » Tue Apr 09, 2013 12:07 pm
- 15 Replies
- 487 Views
- Last post by rth
Thu Apr 11, 2013 5:18 pm
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- How to iterate over all states of all mechanisms in a sec?
by hhshih » Wed Apr 10, 2013 6:05 pm
- 2 Replies
- 352 Views
- Last post by hhshih
Thu Apr 11, 2013 9:54 am
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- NMDA & GUI
by Martenzi » Sat Apr 06, 2013 3:31 am
- 16 Replies
- 479 Views
- Last post by ted
Tue Apr 09, 2013 11:28 am
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- Running two simulations
by shyam_u2 » Sat Apr 06, 2013 12:27 pm
- 1 Replies
- 43 Views
- Last post by ted
Mon Apr 08, 2013 10:28 am
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- Vaa3d swc files
by oren » Sat Apr 06, 2013 4:11 pm
- 2 Replies
- 390 Views
- Last post by oren
Mon Apr 08, 2013 9:25 am
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- check validity of DLL files
by Martenzi » Sat Apr 06, 2013 11:54 pm
- 1 Replies
- 390 Views
- Last post by ted
Sun Apr 07, 2013 4:02 pm
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- Differences in simulation results
by adamimos » Thu Apr 04, 2013 9:26 pm
- 1 Replies
- 41 Views
- Last post by ted
Thu Apr 04, 2013 11:43 pm
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- Adding randomness to NetCon "delay"
by iamdescartes » Fri Mar 29, 2013 2:23 pm
- 5 Replies
- 75 Views
- Last post by ted
Thu Apr 04, 2013 10:57 am
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- implementing recovery from inactivation
by fabien tell » Tue Mar 26, 2013 6:37 am
- 7 Replies
- 494 Views
- Last post by ted
Tue Apr 02, 2013 12:14 pm
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- How to use area(x) and L
by charles1 » Sun Mar 31, 2013 3:03 pm
- 3 Replies
- 49 Views
- Last post by ted
Tue Apr 02, 2013 12:11 pm
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- Important Distinction!
by Martenzi » Sun Mar 31, 2013 8:41 pm
- 1 Replies
- 34 Views
- Last post by ted
Sun Mar 31, 2013 9:38 pm
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- Issues with Saving and Retrieving
by Martenzi » Mon Mar 11, 2013 9:42 pm
- 5 Replies
- 96 Views
- Last post by ted
Sun Mar 31, 2013 9:09 pm
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- MRF, dt, Brent's and error
by charles1 » Sat Mar 30, 2013 11:58 pm
- 3 Replies
- 64 Views
- Last post by ted
Sun Mar 31, 2013 4:29 pm
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- Building a automatic control for opening and closinhoc files
by pass1945 » Fri Oct 26, 2012 2:34 pm
- 5 Replies
- 228 Views
- Last post by ted
Sun Mar 31, 2013 1:27 pm
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- Problem reading .mod files?
by yorichchori » Fri Mar 29, 2013 12:11 pm
- 1 Replies
- 60 Views
- Last post by ted
Fri Mar 29, 2013 5:09 pm
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- ODE solvers for stiff problems (when cvode is not enough)
by Alix » Wed Mar 27, 2013 2:18 pm
- 2 Replies
- 58 Views
- Last post by Alix
Wed Mar 27, 2013 3:35 pm
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- command line for "mod" or "rem"?
by pjthomas » Mon Mar 25, 2013 9:10 pm
- 3 Replies
- 68 Views
- Last post by ted
Wed Mar 27, 2013 12:19 pm
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- "Help Files" without Netscape?
by Martenzi » Tue Mar 26, 2013 8:53 pm
- 1 Replies
- 39 Views
- Last post by ted
Wed Mar 27, 2013 12:15 pm
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- d_lambda optimization
by charles1 » Fri Mar 22, 2013 11:24 pm
- 2 Replies
- 61 Views
- Last post by charles1
Mon Mar 25, 2013 1:16 pm
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- STDP in artificial cells
by peadargrant » Tue Aug 14, 2012 7:32 am
- 6 Replies
- 318 Views
- Last post by ted
Fri Mar 22, 2013 3:43 pm
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- access network topology/schematic information
by R_Jarvis » Tue Mar 06, 2012 12:48 am
- 12 Replies
- 1010 Views
- Last post by ted
Thu Mar 21, 2013 8:45 am
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- Segmentation violation
by patoorio » Fri Mar 15, 2013 1:12 pm
- 9 Replies
- 94 Views
- Last post by hines
Tue Mar 19, 2013 2:33 pm
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- Running mknrndll from the command line
by sl6609 » Mon Mar 18, 2013 4:35 pm
- 2 Replies
- 74 Views
- Last post by sl6609
Tue Mar 19, 2013 10:27 am
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- GIRK channels
by shyam_u2 » Tue Mar 12, 2013 4:23 am
- 10 Replies
- 244 Views
- Last post by ted
Mon Mar 18, 2013 11:23 am
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