ab add_hhstate APCount
abs-math add_ksstate append-List
abs-Vector add_transition append-SectionList
AbsoluteTolerance adjust append-Vector
accept_action-List adjuster apply
accept_action-SectionBrowser alias arc3d
access alias_list ArchiveAndHardcopy
ACG align area
acor allgather Args
action-MechanismStandard allobjects argtype
action-MechanismType allobjectvars arguments
action-Shape allprint ArgValues
active-CVode allreduce ArtificialCell
active-NetCon allroots Ascii
add-Matrix alltoall assign
add-Vector AlphaSynapse Assigned
addexpr amp at
addobject amp0 atan
addrand AnotherVariableToFit atan2
addvar aopen atol
------ page 1 --------
atolscale Breakpoint ChangeColor-Brush
attr_praxis broadcast Changeparmfromlist
axis-Graph browser ChangeText
axis-obsolete Browser Channels
AxisType brush chdir
barrier buffer_size checkpoint-functions
BasicNMODLStatements Build checkpoint-ParallelNetwork
batch_run Builders child
batch_save Button children
bcopy button-menu-panel cholesky_factor
begin-Graph c-Matrix chooser
begin-RangeVarPlot c-Vector cl
beginline-Graph cache_efficient clamp_resist
beginline-PlotShape capacitance classes-general
beginline-Shape cas classes-neuron
begintemplate cell close-File
BeQuiet CellBuilder-Build close-PWManager
binomial CellBuilder-StandardRunTools close_path
boolean_dialog celsius-DistributedMechanisms color-Graph
break celsius-globals color-PlotShape
------ page 2 --------
color-RangeVarPlot continue CurrentValuesAsDefault-ArgValues
color-Shape Continuefor CurrentValuesAsDefault-RunFitter
colormap Continuetil current_method
color_all-PlotShape continue_dialog curve_to
color_all-Shape control_point CVode
color_list-PlotShape convlv d2line
color_list-Shape copy d2line_seg
Command coredump_on_error dae_init_dteps
comments correl DataWeights-Extras
CommonFunctionalForms cos DataWeights-FittoData
CompileTimeOptions count-List debug
compute count-MechanismStandard debug_event
Concentrations count-MechanismType Deck
condition_order count-PWManager deco
connect create default
ConnectingMechanismsTogether create_cell DefaultValueEditor
Constant crosshair define_shape
Constants Crosshair deiconify
contains Currentaxis del
context CurrentlyAccessedSection delay
------ page 3 --------
Delete div endtemplate
delete doEvents eof
delete_section Dofit eq
deltafac done eqinit
depvar doNotify eqn
deriv dot erase-Glyph
Derivative double erase-Graph
det Draw Erase
dialog dstates erase-PlotShape
dialogs dt-globals erase-Shape
diam dt-RunControl EraseAll
diam3d dur erase_all-Graph
diam_changed dur0 erase_all-PlotShape
dir Edit erase_all-Shape
disconnect Electrode-Managers erev
discunif Electrode-StandardRunTools erf
dismiss_action else erfc
Display em erlang
distance end-RangeVarPlot error_weights
DistributedMechanisms end-Timer event-CVode
------ page 4 --------
event-NetCon extracellular File-classes
Events Extras File-NEURONMainMenu
event_queue_info f-CVode fill-Glyph
event_time f-KSTrans fill-Vector
ExecCommand fadvance filter
execerror family finitialize
execute-functions Family-Miscellaneous FInitializeHandler
execute-Python_accessing_Hoc Family-StandardRunTools fit
execute1 Family1 FitCriterion
exec_menu-Graph FamilyLabel Fitting
exec_menu-PlotShape fastflush-Graph FittoData
exec_menu-Shape fastflush-PlotShape fit_praxis
exists fastpas fixed
exp-math fclamp fixed_step
exp-Matrix fclampi flip_to
Exp2Syn fclampv float_epsilon
expression fcurrent floor
ExpSyn feround flush-File
External fft flush-Graph
external FieldEditor flush-PlotShape
------ page 5 --------
flush-Shape fstim geometric
fmatrix fstimi Geometry
fmenu ftype get-MechanismStandard
for full_request get-Vector
forall func getcol
forsec Function getcwd
Fourier FunctionFitter getdiag
fprint-IO functions-general getline
fprint-Matrix functions-neuron getname
frac fwrite-SaveState getrow
fread-SaveState fwrite-Vector gets
fread-Vector gate-KSChan getSpineArea
frecord_init gate-KSState getstr
Frequency gatherspikes getval
FromCellBuilder GatherValues get_loc
from_double GatherVec get_recordvec
from_python general-neuron.exe get_segment
from_vector-Matrix general-pointprocesses ghk
from_vector-RangeVarPlot GeneralParadigm gid2cell
fscan Generator gid2obj
------ page 6 --------
gid_clear group hoc_ac
gid_connect GroupManager Hoc_accessing_Python
gid_exists-ParallelNetManager GUI hoc_ac_
gid_exists-ParallelNetwork GUIMath hoc_cross_x_
gif-Glyph has_loc hoc_cross_y_
gif-Graph has_net_event hoc_obj_
Global has_parent hoc_pointer_
globalRa has_trueparent hoc_stdio
globals HBox Holding
Glyph head HomogeneousSpec
glyph-Glyph help hypergeo
glyph-Graph Help IClamp-Electrode
gmax hh IClamp-pointprocesses
Graph-classes hide iconify
Graph-LookAndFeel hinton id
Graph-NEURONMainMenu hist ident
graph histogram Idraw
Grapher-Graph History id_bbs
Grapher-StandardRunTools hocmech id_world
graphmode HocObject if
------ page 7 --------
ifsec index-Vector int
Impedance-classes indgen integral
Impedance-Tools indvwhere integ_time
ImpedanceRatio indwhere intercept-Deck
ImpedanceTools inf intercept-VBox
ImplementationNotes inftau internal_type
ImpShape init interpolate
Impx Init IntFire1
in Initial IntFire2
Include initnrn IntFire4
ind InitRun Introduction
IndepBegin input inverse
IndepEnd input_phase IO
Independent insert ion-KSChan
IndependentVar-FunctionFitter Inserter-Managers ion-neuron
IndependentVar-Grapher Inserter-StandardRunTools ion_charge
index-KSGate inside ion_register
index-KSState insrt-List ion_style
index-KSTrans insrt-Vector ismapped
index-List Installation ismembrane
------ page 8 --------
isopen KineticSchemeBuilder ligand-KSTrans
issection KSChan line-Graph
is_artificial-MechanismType KSGate line-PlotShape
is_artificial-StringFunctions KSState line-Shape
is_cas KSTrans line-Vector
is_mapped L LinearMechanism
is_name label-Glyph line_info
is_netcon_target label-Graph line_to
is_point_process label-PlotShape List
iterator label-Shape list
ivdialog label-Vector LoadDLL
ivoc_style LandPort LoadHoc
iv_type landscape LoadSession
jacobian leader load_file
jwindow left-RangeVarPlot load_func
KeepLines left-StringFunctions load_proc
keywords-general len load_template
keywords-neuron len_scale-PlotShape loc-general
Kinetic len_scale-Shape loc-Impedance
KineticBuild ligand-KSChan Local
------ page 9 --------
local Managers-PointProcesses meansqerr
localobj map-Deck Mechanism
Localvariabledt map-PWManager mechanisms
Location map-TextEditor MechanismsGlobals
log-math map-VBox MechanismStandard
log-Vector mark-Graph MechanismType
log10-math mark-PlotShape MechType
log10-Vector mark-Shape mech_time
LogAvsX-Impedance mark-Vector medfltr
LogAvsX-ImpedanceTools math median
lognormal Matrix menu
look max Menu
LookAndFeel maxorder MenuExplore
look_take maxstep menu_action-Graph
lw max_histogram menu_action-PlotShape
machine_name max_ind menu_action-Shape
mag MCellRan4 menu_remove
make mcell_ran4 menu_tool-Graph
manager mcell_ran4_init menu_tool-PlotShape
Managers-DistributedMechanisms mean menu_tool-Shape
------ page 10 --------
min n3d Neuron
minstep name-KSChan neuron.exe
min_ind name-KSState neuronhome
Miscellaneous name-MechanismStandard NEURONMainMenu
mktemp name-PWManager new
MLCG NameValues NewAxis
ModelDescriptionIssues name_declared NewView
ModelDescriptionLanguage nchild new_path
MoveText-Graph ncol ngate
MoveText-PlotShape nc_append nhost
move_last nearest-PlotShape nhost_bbs
move_to nearest-Shape nhost_world
MPI negexp nligand
mul nernst NMODL
mulm NetCon NMODLtoNEURON
MulRunFitter netconlist Nonlinear
muls NetStim Nonspecific_Current
MultipleRunFitter NetworkBuilder normal
multisplit NetworkCell Notification
mulv neuron nrnglobalmechmenu
------ page 11 --------
nrnmechmenu objectvar ParallelNetwork
nrnpointmenu object_id ParallelTransfer
nrnpython object_pop Parameter
nrnsecmenu object_push ParameterizedFunction
nrnversion objref ParameterRangeLimits
nrn_load_dll observe-PlotShape ParameterRanges
nrow observe-Shape Parameterstovary
nseg obsolete parent
nstate-KSChan order parent_connection
nstate-KSGate origin parent_node
nthread Other parent_section
ntrans out parm
NULLobject outputcell partition
numarg pack pas
NumberOfDataRegions Panel Path
o panel pcontinue
obfunc PaperItem PhasePlane
object paper_place PickVector
ObjectName ParallelContext pinit
ObjectOrientedProgramming ParallelNetManager play-Random
------ page 12 --------
play-Vector Pointer-NMODLtoNEURON pow-Matrix
Play Pointer-Communication pow-Vector
play_remove PointGroup power
Plot-FunctionFitter PointManager pp_begin
plot-Graph pointprocesses pp_next
Plot-Grapher PointProcesses-Tools pr
plot-obsolete PointProcesses-Viewers PraxisFit
plot-Vector PointProcessGroupManager pre
ploterr PointProcessLocator precell
PlotRange PointProcessManager precelllist
PlotShape-classes point_mark predeclared-variables
PlotShape-LookAndFeel point_mark_remove prelist
Plotsms Point_Process preloc
PlotWhat-Graph poisson prepend
PlotWhat-PlotShape pop_section print
plotx post Print
ploty postcell printf-File
plt postcelllist printf-IO
Pointer-BasicNMODLStatements postloc printf-Matrix
Pointer-classes PostScript printf-Vector
------ page 13 --------
printfile-Graph prun pyret
printfile-PlotShape psection Python
printfile-PWManager psolve-ParallelNetManager PythonObject
printfile-Shape psolve-ParallelNetwork Python_accessing_Hoc
printnames psth queue_mode
PrintToFile pt3dadd Quiet
print_event_queue pt3dchange Quit-File
print_session pt3dclear quit
priority pt3dconst Quit-Other
prjnrnci pt3dinsert Ra
prjnrncmp pt3dremove Random
prjnrnco pt3dstyle Random123
prjnrninit public Random123_globalindex
prjnrnpr push_section Range
prmat push_selected-PlotShape RangeVarPlot
proc push_selected-Shape ratio
Procedure pval_praxis Rationale
ProjectManagement PWM read
prstat PWManager Read
prstim pwman_place ReadData
------ page 14 --------
ReadDataFile remove-Vector right-RangeVarPlot
readonly Removeparmfromlist right-StringFunctions
RealTime remove_all root
rebin remove_last ropen-File
recentdir remove_state ropen-IO
record-CVode remove_transition rotate-PlotShape
record-NetCon repick rotate-Shape
record-Vector resample rotate-Vector
record_remove resize-Matrix Rotate3D
reduce resize-Vector RoughFit
ref restore Roughfit
Reference Retrieve RoundView
references retrieveaudit round_robin
register_cell RetrievefromFile rtol
regraph return run
relative Returnlevel RunControl-StandardRunTools
remove-Deck retval RunControl-Tools
remove-List reverse RunFitter-Fitting
remove-MechanismType re_init RunFitter-StandardRunTools
remove-SectionList ri Running-FunctionFitter
------ page 15 --------
Running-RunFitter scale-PlotShape SectionBrowser
runworker scale-PWManager SectionList
s scale-Vector sectionname
save-Deck scanf-Matrix SectionRef
save-MechanismStandard scanf-Vector section_exists
save-PWManager scanstr section_orientation
save-SaveState scantil section_owner
save-VBox scanvar sec_in_thread
SaveAll Scene seek
saveaudit Scene_equal_View Segment
SaveRestoreFitParams ScreenItem select-List
SaveRestoreFunction scroll_pos select-MechanismType
SaveSelected sec select-SectionBrowser
savesession SEClamp select-Shape
SaveState secname selected-List
SavetoFile secondorder selected-MechanismType
save_name-Graph seconds SelectPrinter
save_name-PlotShape Section-neuron select_action-List
save_name-Shape Section-PlotShape select_action-SectionBrowser
save_session Section-Python_accessing_Hoc send_time
------ page 16 --------
seq set_gid2node-ParallelNetwork SingleRunFit
Session set_maxstep SingleStep
set-MechanismStandard Shape-classes size-Graph
set-Vector Shape-Impedance size-PlotShape
setcol ShapeBrowser size-Shape
setcolor ShapeName size-VBox
setdata Shapeplot size-Vector
setdiag ShapePlot smhist
setpointer ShapeStyle snap
setpost show-PlotShape solv
setrand show-Shape solve-CVode
setrow ShowMechanism solve-functions
setSpineArea show_errmess_always sort
setstructure show_winio sortindex
settext simgraph source_var
setup_transfer simgraph_remove SpacePlot
setval sin-math spctrm
SetView sin-Vector spgetrowval
set_f sindex spikebin
set_gid2node-ParallelNetManager singlecompartment spike_compress
------ page 17 --------
spike_record-ParallelNetManager Stateaxis store_events
spike_record-ParallelNetwork statement strcmp
spike_stat statename strdef
spike_statistics states StringFunctions
spine3d state_magnitudes string_dialog
splitcell-ParallelNetManager statistics stroke
splitcell-ParallelTransfer stderr sub
sprint stdev submit
sprowlen Steps-FunctionFitter substr
sqrt-math Steps-Grapher subtree
sqrt-Vector step_time SubWorld
src stiff subworlds
srcgid stop Suffix
sred Stop sum
sscanf StopAtNextQuadForm sumgauss
StandardRunTools StopatnextQuadForm sumsq
start stoprun svd
startsw stopsw symbols
State stopwatch SymChooser
state stop_praxis symmeig
------ page 18 --------
syn this_section transfer
synlist Threads transfer_phase
syntax thread_busywait Translate
system thread_ctime transpose
t-globals thread_how_many_proc Tray
t-RunControl thread_stat trigavg
Table threshold-NetCon trueparent
tail threshold-ParallelNetwork Tstop
take time type
tanh-math timeout Ungrouped
tanh-Vector TimePlot uniform
target Timer uninsert
target_var Tools unique
tell tools units
Testlevel Topology unix_mac_pc
text-SymChooser topology unlink
text-TextEditor to_python unmap-Deck
TextEditor to_vector-Matrix unmap-Graph
this to_vector-RangeVarPlot unmap-PlotShape
this_node trans unmap-Shape
------ page 19 --------
unmap-VBox ValueFieldEditor view-PlotShape
unpack var view-Shape
unref variable ViewAxis
upkpyobj VariableScale ViewBox
upkscalar VariableStepControl Viewers-DistributedMechanisms
upkstr Variabletofit Viewers-PointProcesses
upkvec variable_domain view_count-Graph
Usage VBox view_count-PlotShape
Useion VClamp-Electrode view_count-Shape
userid VClamp-pointprocesses View_equal_Plot
Usevariabledt VClampFamily view_info
use_daspk VClampigraph view_size
use_local_dt Vector-classes VirtualScreen
use_long_double vector Voltageaxis
use_mcell_ran4 Vector-NEURONMainMenu vread-File
use_mxb VectorMovie vread-Vector
val VectorPlay vtransfer_time
Valence VecWrap vwrite-File
valid vfixed vwrite-Vector
ValueEditor view-Graph wait_time
------ page 20 --------
want_all_spikes x-NetCon xvarlabel
WatchTheFit x-Vector y3d
wcnt x3d yaxis
weibull xaxis Yexpr
weight xbutton ygather
where xcheckbox yscatter
while xexpr z3d
WholeScene Xexpr zero
wholetree xfixedvalue ZoomIn10
Window xlabel ZoomInOut
WindowTitlesPrinted xmenu ZoomOut10
window_place xopen-File
WinExec xopen-IO
wopen-File xpanel
wopen-IO xpvalue
working xradiobutton
workingdir xred
Write xslider
writehoc xstatebutton
x-Matrix xvalue
------ page 21 --------