// Created 01/29/04 13:37:59 by /home/hines/bin/loadfiles //================================================================ // INSERTED net2run.hoc load_file("nrngui.hoc") //================================================================ // INSERTED net2run.ses objectvar save_window_, rvp_ objectvar scene_vector_[7] objectvar ocbox_, ocbox_list_, scene_, scene_list_ {ocbox_list_ = new List() scene_list_ = new List()} {pwman_place(0,0,0)} //Begin ArtCellGUI[0] { } load_file("netbild.hoc") { } ocbox_ = new ArtCellGUI(1) {object_push(ocbox_)} { tobj = new MechanismStandard("NetStim") tobj.set("interval", 5, 0) tobj.set("number", 50, 0) tobj.set("start", 0, 0) tobj.set("noise", 0, 0) } {append(tobj, "SE")} { tobj = new MechanismStandard("NetStim") tobj.set("interval", 10, 0) tobj.set("number", 5, 0) tobj.set("start", 20, 0) tobj.set("noise", 0, 0) } {append(tobj, "SI")} {object_pop()} { ocbox_.map("ArtCellGUI[0]", 438, 85, 449.28, 291.84) } objref ocbox_ //End ArtCellGUI[0] {WindowMenu[0].ses_gid(1, 0, 0, "cell types")} //Begin NetReadyCellGUI[0] { } {ocbox_ = new NetReadyCellGUI(1)} {ocbox_.tobj = new CellBuild(1)} {object_push(ocbox_.tobj)} { version(5.1) continuous = 0 } {object_push(topol)} { first = 0 slist.remove_all() sname = "dend" objref tobj } { tobj = new CellBuildSection("soma",0, 0, tobj, 0) slist.append(tobj) tobj.position(0,0,15,0) tobj.lx=-17.7312 tobj.ly=19.6453 tobj.i3d=0 tobj = new CellBuildSection("dend",0, 0, tobj, 1) slist.append(tobj) tobj.parent=slist.object(0) tobj.position(15,0,105,0) tobj.lx=58.2778 tobj.ly=-14.9043 tobj.i3d=0 all_init() } for i=0, slist.count-1 {slist.object(i).rdses()} {object_pop()} { } {object_push(subsets)} {first = 0} {consist()} {object_pop()} { } {object_push(geom)} { first = 0 tobj = new GeoSpec(5) tobj.value = 0.1 bild.subsets.snlist.object(0).geo.append(tobj) tobj = new GeoSpec(2) tobj.value = 500 bild.topol.slist.object(0).geo.append(tobj) tobj = new GeoSpec(0) tobj.value = 200 bild.topol.slist.object(1).geo.append(tobj) tobj = new GeoSpec(1) tobj.value = 1 bild.topol.slist.object(1).geo.append(tobj) set_default() } {object_pop()} { } {object_push(memb)} {first=0} { tobj = new GeoSpec(0) tobj.value = 100 tobj.set_default() tobj = new MStanWrap(tobj, 0) bild.subsets.snlist.object(0).ml.append(tobj) } { tobj = new GeoSpec(1) tobj.value = 1 tobj.set_default() tobj = new MStanWrap(tobj, 0) bild.subsets.snlist.object(0).ml.append(tobj) } { tobj = new MechanismStandard("hh") tobj.set("gnabar_hh", 0.12, 0) tobj.set("gkbar_hh", 0.036, 0) tobj.set("gl_hh", 0.0003, 0) tobj.set("el_hh", -54.3, 0) tobj = new MStanWrap(tobj, 1) bild.topol.slist.object(0).ml.append(tobj) } { tobj = new MechanismStandard("pas") tobj.set("g_pas", 0.001, 0) tobj.set("e_pas", -65, 0) tobj = new MStanWrap(tobj, 1) bild.topol.slist.object(1).ml.append(tobj) } {object_pop()} { } {object_push(manage)} { first = 0 classname = "BallStick" etop=1 esub=1 egeom=1 emem=1 itop=1 isub=0 igeom=0 imem=0 bild.topol.names_off = 0 bild.topol.circles_off = 0 output_index = 0 output_x = 1 } {object_pop()} { cexport() } {object_pop()} { save_window_=ocbox_.tobj.gtopol save_window_.size(-200,200,-150,150) scene_vector_[3] = save_window_ ocbox_.tobj.gtopol = save_window_ save_window_.save_name("ocbox_.tobj.gtopol") } {object_push(ocbox_)} stgui = new SynTypeGUI(1) {object_push(stgui)} { tobj = new MechanismStandard("ExpSyn") tobj.set("tau", 2, 0) tobj.set("e", 0, 0) } {append(tobj, "E")} { tobj = new MechanismStandard("ExpSyn") tobj.set("tau", 5, 0) tobj.set("e", -80, 0) } {append(tobj, "I")} {object_pop()} nrc = new NetReadyCell(tobj, stgui.stypelist) nrc.name = "B" tobj = nrc.cb.topol.slist.object(1) {nrc.synlist.append(new SynTypeInstance(nrc.stype.object[0],tobj,0.8,0.5,-1))} tobj = nrc.cb.topol.slist.object(1) {nrc.synlist.append(new SynTypeInstance(nrc.stype.object[1],tobj,0.1,0.5,-1))} {g.size(-167.36,167.36,-125.572,125.572)} {object_pop()} { ocbox_.map("NetReadyCellGUI[0]", 5, 85, 404.16, 361.92) } objref ocbox_ //End NetReadyCellGUI[0] {WindowMenu[0].ses_gid(0, 0, 0, "cell types")} //Begin NetGUI[0] { } {ocbox_ = new NetGUI(1)} {object_push(ocbox_)} {mapold2new = new Vector() missing = new List()} original_type("B") original_type("SE") original_type("SI") newnode(0, -52, -6) newnode(1, 15, 47) newnode(2, -51, 47) newedge(1, 0, 0, 0.01, 1) newedge(2, 0, 1, 0.01, 1) {create_ = 1 create1()} {g.size(-166.667,166.667,-125.277,125.277)} {object_pop()} { ocbox_.map("NetGUI[0]", 322, 512, 527.04, 327.36) } objref ocbox_ //End NetGUI[0] //Begin SpikePlot[0] for NetData[0] { } {ocbox_ = new SpikePlot(NetData[0],1)} {object_push(ocbox_)} mode = 1 fwindow = 100 binwidth = 0.1 build() {g.size(0,500,0,4)} {object_pop()} { ocbox_.map("SpikePlot[0] for NetData[0]", 321, 134, 304.32, 333.12) } objref ocbox_ //End SpikePlot[0] for NetData[0] {WindowMenu[0].ses_gid(0, 1, 1, "control")} { xpanel("RunControl", 0) v_init = -65 xvalue("Init","v_init", 1,"stdinit()", 1, 1 ) xbutton("Init & Run","run()") xbutton("Stop","stoprun=1") runStopAt = 5 xvalue("Continue til","runStopAt", 1,"{continuerun(runStopAt) stoprun=1}", 1, 1 ) runStopIn = 1 xvalue("Continue for","runStopIn", 1,"{continuerun(t + runStopIn) stoprun=1}", 1, 1 ) xbutton("Single Step","steprun()") t = 527.214 xvalue("t","t", 2 ) tstop = 500 xvalue("Tstop","tstop", 1,"tstop_changed()", 0, 1 ) dt = 0.025 xvalue("dt","dt", 1,"setdt()", 0, 1 ) steps_per_ms = 40 xvalue("Points plotted/ms","steps_per_ms", 1,"setdt()", 0, 1 ) xcheckbox("Quiet",&stdrun_quiet,"") realtime = 2 xvalue("Real Time","realtime", 0,"", 0, 1 ) xpanel(14,132) } {WindowMenu[0].ses_gid(0, 1, 1, "control")} { save_window_ = new Graph(0) save_window_.size(0,540,-80,40) scene_vector_[6] = save_window_ {save_window_.view(0, -80, 540, 120, 653, 135, 300.48, 200.32)} graphList[0].append(save_window_) save_window_.save_name("graphList[0].") save_window_.addvar("B_BallStick[0].soma.v( 0.5 )", 1, 1, 0.266454, 1.03898, 2) } {WindowMenu[0].ses_gid(0, 1, 1, "control")} //Begin VariableTimeStep { ocbox_ = NumericalMethodPanel[0] ocbox_ = ocbox_.b1 ocbox_.map("VariableTimeStep", 11, 529, 272.64, 106.56) } objref ocbox_ //End VariableTimeStep {WindowMenu[0].ses_gid(0, 1, 1, "control")} objectvar scene_vector_[1] {doNotify()} // END net2run.ses //================================================================ cvode_active(1) object_push(NetGUI[0]) wman = new NetEdgeGUI(net, 0) object_pop() run() // END net2run.hoc //================================================================